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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 184.8
Min RPKM: 19.0
Std RPKM: 30.2
Median RPKM: 55.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
184.8
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
181.6
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
151.3
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
146.5
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
123.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
120.0
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
119.3
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
112.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
111.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
109.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
108.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
104.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
101.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
98.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
97.4
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
97.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
97.0
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
95.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
93.3
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
89.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
87.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
85.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
84.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
80.3
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
79.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
78.3
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
76.0
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
74.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
74.0
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
73.6
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
72.2
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
70.7
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
70.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
69.3
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
68.8
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
68.7
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
68.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
68.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
66.4
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
65.6
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
65.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
63.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
62.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
62.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
62.1
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
61.2
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
61.1
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
60.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
59.4
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
58.9
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
58.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
58.8
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
58.6
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
57.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
57.4
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
56.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
56.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
56.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
55.8
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
55.5
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
54.8
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
54.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
53.5
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
53.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
52.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
52.2
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
51.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
50.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
49.4
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
49.0
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
48.4
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
48.4
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
47.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
47.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
46.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
46.1
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
46.0
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
45.0
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
45.0
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
44.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
44.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
44.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
44.1
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
42.9
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
42.9
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
42.5
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
42.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
42.1
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
41.7
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
41.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
40.7
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
40.2
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
40.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
39.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
39.8
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
39.7
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
38.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
38.6
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
38.6
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
38.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
38.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
38.1
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
37.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
37.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
36.8
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
36.0
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
35.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
34.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
33.1
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
32.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
30.8
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
30.3
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
29.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
26.9
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
26.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
22.5
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
19.0
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.