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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 143.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 185
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 66.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 185.4
Min RPKM: 23.8
Std RPKM: 30.7
Median RPKM: 90.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
185.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
179.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
176.6
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
175.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
173.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
171.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
167.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
165.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
162.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
161.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
157.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
152.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
150.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
148.7
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
148.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
148.4
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
148.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
146.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
141.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
137.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
136.9
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
136.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
135.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
133.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
132.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
132.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
131.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
131.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
131.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
130.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
129.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
129.0
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
128.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
127.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
126.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
126.5
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
126.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
126.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
125.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
125.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
125.3
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
125.1
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
124.8
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
123.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
122.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
122.4
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
121.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
121.7
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
121.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
121.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
119.8
GTEX-X261-0626-SM-3NMD9
50-59 years, male
119.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
118.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
118.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
118.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
117.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
116.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
116.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
115.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
115.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
114.4
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
112.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
110.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
108.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
108.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
107.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
107.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
106.9
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
106.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
106.3
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
105.8
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
105.0
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
104.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
104.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
104.6
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
104.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
104.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
103.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
103.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
102.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
102.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
102.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
101.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
100.7
GTEX-XBED-1626-SM-47JYN
60-69 years, male
100.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
99.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
98.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
98.7
GTEX-111YS-1926-SM-5GICC
60-69 years, male
98.1
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
97.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
97.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
96.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
96.1
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
95.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
94.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
94.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
94.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
94.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
93.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
92.4
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
91.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
91.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
91.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
90.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
90.7
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
90.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
90.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
90.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
89.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
89.0
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
89.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
89.0
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
88.2
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
88.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
87.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
87.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
87.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
87.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
87.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
86.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
86.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
85.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
85.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
84.5
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
84.2
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
84.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
83.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
82.7
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
82.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
81.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
81.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
81.0
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
80.5
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
80.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
79.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
79.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
79.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
78.9
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
78.5
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
78.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
78.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
77.8
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
77.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
77.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
77.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
77.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
77.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
77.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
77.0
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
76.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
76.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
75.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
75.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
75.2
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
75.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
73.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
72.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
72.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
72.6
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
72.5
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
72.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
72.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
72.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
72.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
71.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
71.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
71.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
71.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
70.8
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
70.1
GTEX-S341-1526-SM-4AD6K
40-49 years, female
69.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
69.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
69.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
69.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
69.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
69.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
68.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
68.6
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
68.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
68.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
68.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
67.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
67.4
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
67.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
67.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
66.9
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
66.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
65.4
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
65.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
63.9
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
63.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
62.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
61.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
61.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
61.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
60.9
GTEX-REY6-2426-SM-48FF5
60-69 years, male
60.3
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
60.2
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
59.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
59.7
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
58.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
56.1
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
55.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
55.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
54.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
53.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
53.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
50.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
49.3
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
49.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
44.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
43.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
38.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
23.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.