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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 242.7
Min RPKM: 78.3
Std RPKM: 33.5
Median RPKM: 137.4
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
242.7
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
215.9
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
211.3
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
209.5
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
197.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
197.2
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
195.3
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
195.0
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
193.1
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
191.5
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
187.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
186.6
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
183.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
177.9
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
177.7
GTEX-Q734-0226-SM-48U1A
40-49 years, female
176.0
GTEX-PX3G-0926-SM-48U12
20-29 years, female
175.2
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
174.7
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
174.7
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
174.2
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
172.2
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
171.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
171.2
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
169.5
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
167.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
167.6
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
166.1
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
164.6
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
162.0
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
161.4
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
160.5
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
158.9
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
158.3
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
157.8
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
156.2
GTEX-QLQW-0126-SM-447BK
30-39 years, male
155.9
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
155.4
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
154.4
GTEX-QV31-0126-SM-447BP
30-39 years, male
152.5
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
151.6
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
150.8
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
148.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
148.7
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
147.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
146.4
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
145.3
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
144.7
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
143.5
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
143.1
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
142.9
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
142.5
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
137.6
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
137.2
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
136.4
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
136.2
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
135.3
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
134.8
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
133.5
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
130.6
GTEX-R55G-0226-SM-48FEI
40-49 years, female
130.0
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
128.6
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
127.8
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
127.5
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
127.2
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
126.9
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
125.3
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
122.8
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
120.3
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
119.4
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
119.2
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
117.4
GTEX-144GN-2126-SM-5O99D
50-59 years, male
117.0
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
116.9
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
115.7
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
115.1
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
115.0
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
114.2
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
113.9
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
112.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
112.1
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
111.7
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
109.7
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
108.0
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
107.6
GTEX-QCQG-0226-SM-48U28
50-59 years, female
107.3
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
107.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
106.8
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
105.8
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
104.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
103.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
103.4
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
101.0
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
100.9
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
100.2
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
100.1
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
98.7
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
98.1
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
96.9
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
96.8
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
95.5
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
95.2
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
92.6
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
90.7
GTEX-X585-1826-SM-4QAS3
50-59 years, male
78.3
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.