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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 506.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1066.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 273.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 544.4
Min RPKM: 61.4
Std RPKM: 46.6
Median RPKM: 122.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
544.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
292.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
278.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
255.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
241.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
233.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
231.0
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
225.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
225.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
219.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
219.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
215.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
208.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
205.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
203.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
189.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
189.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
189.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
184.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
184.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
183.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
177.0
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
174.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
173.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
170.3
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
166.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
166.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
165.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
165.3
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
164.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
164.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
163.3
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
162.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
161.3
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
160.6
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
159.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
158.7
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
157.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
156.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
154.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
153.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
151.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
151.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
151.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
148.9
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
146.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
144.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
143.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
142.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
141.9
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
141.9
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
141.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
140.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
140.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
140.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
139.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
139.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
138.8
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
137.4
GTEX-XBED-1626-SM-47JYN
60-69 years, male
136.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
136.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
136.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
135.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
135.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
134.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
134.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
134.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
134.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
133.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
133.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
132.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
132.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
132.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
131.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
131.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
129.9
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
129.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
129.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
129.3
GTEX-S341-1526-SM-4AD6K
40-49 years, female
129.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
129.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
128.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
128.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
128.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
128.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
127.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
127.5
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
126.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
126.6
GTEX-X261-0626-SM-3NMD9
50-59 years, male
126.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
126.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
126.1
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
125.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
125.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
125.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
125.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
125.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
125.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
124.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
124.6
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
124.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
124.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
123.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
122.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
122.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
122.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
122.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
122.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
121.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
120.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
120.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
120.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
119.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
118.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
118.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
118.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
117.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
117.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
116.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
115.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
115.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
115.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
115.1
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
115.0
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
114.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
114.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
114.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
114.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
113.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
113.2
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
112.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
112.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
112.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
111.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
111.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
110.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
110.8
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
110.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
110.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
110.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
109.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
108.8
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
108.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
108.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
107.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
107.7
GTEX-11OF3-1926-SM-59889
60-69 years, male
107.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
107.4
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
107.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
106.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
106.6
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
106.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
106.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
106.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
106.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
106.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
106.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
105.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
105.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
104.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
103.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
103.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
103.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
103.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
102.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
102.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
102.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
102.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
101.6
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
101.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
101.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
101.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
101.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
100.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
100.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
99.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
99.6
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
98.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
98.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
98.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
98.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
97.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
97.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
97.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
97.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
96.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
96.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
95.7
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
95.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
95.4
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
95.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
94.8
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
93.7
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
93.3
GTEX-R53T-1526-SM-48FEK
50-59 years, female
92.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
92.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
92.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
92.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
92.1
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
92.0
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
91.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
89.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
89.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
88.3
GTEX-144GM-0926-SM-5O994
20-29 years, male
87.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
86.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
85.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
85.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
84.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
84.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
83.8
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
83.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
68.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
61.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.