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ATP6V0B
COLON - Expression summary
RNA expressioni
HPA:84.1TPM
GTEx:26.5RPKM
FANTOM5:40.8Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 84.1
overview Male, age 54 Sample 1
TPM: 81.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 74.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 75.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 62.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 73.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 81.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 89.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 106.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 90
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 74.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 101.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 88.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 93.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 26.5
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 20.4
Samples: 149

Max RPKM: 36.4
Min RPKM: 12.4
Std RPKM: 3.7
Median RPKM: 20.2
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 36.4
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 31.4
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 29.9
GTEX-V955-1726-SM-4JBHF 60-69 years, male 27.9
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 27.6
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 27.4
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 27.1
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 26.7
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 26.6
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 26.4
Show all
Colon - Transverse
RPKM: 31.0
Samples: 196

Max RPKM: 63.4
Min RPKM: 14.1
Std RPKM: 9.9
Median RPKM: 30.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 63.4
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 58.9
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 58.6
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 56.3
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 54.9
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 54.6
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 53.2
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 52.5
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 52.3
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 49.5
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 40.8
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 38.6
FF:10014-101C5 62,83,84 years, mixed 40.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.