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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 113.3
Min RPKM: 2.2
Std RPKM: 13.0
Median RPKM: 11.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
113.3
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
70.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
61.7
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
34.7
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
33.6
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
30.5
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
24.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
24.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
23.3
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
23.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
22.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
22.6
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
22.4
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
21.8
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
21.6
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
21.1
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
20.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
20.2
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
19.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
19.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
18.7
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
18.7
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
18.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
18.0
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
17.9
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
17.6
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
17.2
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
16.9
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
16.6
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
16.4
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
16.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
16.2
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
16.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
15.9
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
15.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
15.6
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
15.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
15.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
15.0
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
14.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
14.5
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
14.3
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
14.0
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
13.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
13.5
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
13.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
13.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
13.3
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
13.3
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
13.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
13.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
12.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
12.6
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
12.6
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
12.5
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
12.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
12.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
12.0
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
11.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
11.8
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
11.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
11.7
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
11.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
11.1
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
11.1
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
11.0
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
10.6
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
10.4
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
10.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
10.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
10.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
10.3
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
10.1
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
10.1
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
10.0
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
10.0
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
9.9
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
9.8
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
9.8
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
9.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
9.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
8.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
8.6
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
8.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
8.3
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
8.3
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
8.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
8.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
7.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
7.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
7.4
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
7.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
7.3
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
7.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
7.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
7.1
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
7.1
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
7.0
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
6.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
6.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
6.2
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
6.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
6.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
5.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
5.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
5.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
5.6
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
5.1
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
4.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
4.6
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
4.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
4.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
4.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
3.9
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
3.5
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
2.9
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
2.2
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.