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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 206.8
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 283.5
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 213.1
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 203.3
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 176.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 180.9
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 227
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 365.7
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 166.0
Min RPKM: 1.5
Std RPKM: 37.0
Median RPKM: 72.7
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
166.0
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
154.2
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
153.3
GTEX-YECK-1926-SM-4W21H
60-69 years, male
141.9
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
140.7
GTEX-RN64-1826-SM-48FDV
50-59 years, male
139.7
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
128.8
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
128.0
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
124.1
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
123.5
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
117.6
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
117.4
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
117.2
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
116.2
GTEX-P78B-1326-SM-3P611
40-49 years, female
114.7
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
114.3
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
113.9
GTEX-1399T-0826-SM-5IFES
60-69 years, male
112.2
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
107.6
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
107.1
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
106.3
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
105.4
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
102.8
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
102.4
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
101.1
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
99.8
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
99.3
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
97.9
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
97.2
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
96.4
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
95.3
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
94.4
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
94.0
GTEX-RU72-1426-SM-46MUF
50-59 years, female
93.6
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
91.2
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
91.1
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
91.0
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
90.9
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
89.7
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
88.9
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
88.7
GTEX-R53T-0326-SM-48FEC
50-59 years, female
88.4
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
87.3
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
87.1
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
85.9
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
85.9
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
85.0
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
83.5
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
81.7
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
81.2
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
80.5
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
80.0
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
79.9
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
77.5
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
77.1
GTEX-11ZUS-2526-SM-59872
30-39 years, male
76.8
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
75.6
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
73.9
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
72.8
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
72.7
GTEX-X261-1726-SM-4PQYT
50-59 years, male
72.1
GTEX-13112-1426-SM-5EGH8
50-59 years, male
71.0
GTEX-12696-0826-SM-5EGGE
60-69 years, male
70.1
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
70.1
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
66.3
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
65.7
GTEX-11GSP-0626-SM-5986T
60-69 years, female
65.5
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
65.4
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
65.3
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
63.9
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
63.0
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
62.8
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
61.5
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
61.2
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
60.6
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
59.0
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
57.3
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
57.1
GTEX-13113-1326-SM-5GCOI
60-69 years, female
56.3
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
55.7
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
55.5
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
54.2
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
54.1
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
53.5
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
53.3
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
52.0
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
48.9
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
45.5
GTEX-QESD-2026-SM-447BI
20-29 years, male
43.9
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
43.4
GTEX-QEL4-1226-SM-447A4
50-59 years, male
40.7
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
39.3
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
39.3
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
36.8
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
36.0
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
35.1
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
32.7
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
32.7
GTEX-S32W-1926-SM-4AD63
50-59 years, female
30.5
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
29.9
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
27.9
GTEX-REY6-1226-SM-48FDR
60-69 years, male
27.4
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
27.3
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
22.7
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
21.6
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
20.4
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
20.2
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
19.3
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
19.0
GTEX-Q734-0326-SM-48U15
40-49 years, female
16.6
GTEX-S33H-1626-SM-4AD68
30-39 years, male
12.4
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
10.2
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
10.1
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
9.1
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
8.8
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
7.0
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
4.1
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
2.1
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
1.5
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
