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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 113
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 804.2
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 371.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 118.7
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 554.4
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 399.3
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 337.2
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 110.1
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 221.0
Min RPKM: 0.0
Std RPKM: 47.3
Median RPKM: 68.9
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
221.0
GTEX-S33H-1626-SM-4AD68
30-39 years, male
211.2
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
178.0
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
162.1
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
160.0
GTEX-YECK-1926-SM-4W21H
60-69 years, male
156.8
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
155.2
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
153.9
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
151.4
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
147.4
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
144.3
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
142.6
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
135.9
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
134.9
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
129.8
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
129.7
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
127.7
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
124.3
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
121.0
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
119.7
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
116.9
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
114.6
GTEX-R53T-0326-SM-48FEC
50-59 years, female
114.5
GTEX-RU72-1426-SM-46MUF
50-59 years, female
114.4
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
110.3
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
109.0
GTEX-RN64-1826-SM-48FDV
50-59 years, male
107.4
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
106.7
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
104.4
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
104.0
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
101.8
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
101.3
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
99.5
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
95.4
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
92.7
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
91.5
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
91.2
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
91.0
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
89.2
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
88.0
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
87.8
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
87.6
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
87.5
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
87.4
GTEX-1399T-0826-SM-5IFES
60-69 years, male
85.9
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
84.8
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
83.2
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
82.6
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
82.1
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
81.7
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
81.0
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
79.6
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
79.2
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
79.0
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
78.1
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
76.6
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
74.1
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
72.7
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
68.9
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
68.9
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
68.8
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
67.4
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
67.1
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
67.0
GTEX-X261-1726-SM-4PQYT
50-59 years, male
66.5
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
63.7
GTEX-12696-0826-SM-5EGGE
60-69 years, male
61.4
GTEX-Q734-0326-SM-48U15
40-49 years, female
61.3
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
59.8
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
58.3
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
57.9
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
57.7
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
56.9
GTEX-REY6-1226-SM-48FDR
60-69 years, male
56.4
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
53.1
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
52.0
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
51.1
GTEX-S32W-1926-SM-4AD63
50-59 years, female
50.9
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
47.6
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
46.7
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
46.5
GTEX-13113-1326-SM-5GCOI
60-69 years, female
45.4
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
44.7
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
41.2
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
41.2
GTEX-11ZUS-2526-SM-59872
30-39 years, male
41.1
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
40.5
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
40.3
GTEX-QEL4-1226-SM-447A4
50-59 years, male
38.6
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
36.6
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
35.2
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
33.9
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
31.7
GTEX-P78B-1326-SM-3P611
40-49 years, female
31.3
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
31.1
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
30.3
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
29.5
GTEX-13112-1426-SM-5EGH8
50-59 years, male
27.1
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
24.2
GTEX-QESD-2026-SM-447BI
20-29 years, male
23.6
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
21.4
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
21.1
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
20.8
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
19.3
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
18.2
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
17.8
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
17.8
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
16.9
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
13.1
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
12.4
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
0.4
GTEX-11GSP-0626-SM-5986T
60-69 years, female
0.2
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
0.2
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
0.2
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
0.2
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
0.1
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
0.1
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
0.1
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
0.0
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
