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RAP1A
COLON - Expression summary
RNA expressioni
HPA:91.3TPM
GTEx:30.2RPKM
FANTOM5:147.9Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 91.3
overview Male, age 54 Sample 1
TPM: 100.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 83.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 72.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 92.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 64.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 165.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 77.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 70.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 103.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 88.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 95.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 104.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 67.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 30.2
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 40.8
Samples: 149

Max RPKM: 62.3
Min RPKM: 22.4
Std RPKM: 8.6
Median RPKM: 39.8
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 62.3
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 61.8
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 58.9
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 57.2
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 57.1
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 56.4
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 55.6
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 54.4
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 54.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 54.1
Show all
Colon - Transverse
RPKM: 22.1
Samples: 196

Max RPKM: 58.5
Min RPKM: 6.9
Std RPKM: 12.4
Median RPKM: 17.8
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 58.5
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 58.0
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 55.8
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 54.4
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 53.9
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 53.4
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 52.5
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 49.0
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 48.7
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 46.6
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 147.9
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 114.4
FF:10014-101C5 62,83,84 years, mixed 147.9

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.