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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 427.1
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 880.2
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 429.2
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 103.6
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 527.1
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 317.6
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 175.1
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 255.4
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 403.2
Min RPKM: 9.2
Std RPKM: 83.8
Median RPKM: 114.8
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
403.2
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
367.5
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
354.6
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
336.9
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
328.3
GTEX-13113-1326-SM-5GCOI
60-69 years, female
317.1
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
294.8
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
293.3
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
291.3
GTEX-RN64-1826-SM-48FDV
50-59 years, male
289.9
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
275.6
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
272.8
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
261.8
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
253.4
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
242.9
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
240.6
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
235.1
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
234.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
226.1
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
208.0
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
206.7
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
196.9
GTEX-YECK-1926-SM-4W21H
60-69 years, male
196.2
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
186.4
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
179.3
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
177.9
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
173.7
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
172.9
GTEX-REY6-1226-SM-48FDR
60-69 years, male
172.5
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
172.1
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
166.9
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
164.8
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
162.8
GTEX-12696-0826-SM-5EGGE
60-69 years, male
160.7
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
159.8
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
159.6
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
156.1
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
155.8
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
154.9
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
154.6
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
154.3
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
151.9
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
151.3
GTEX-11GSP-0626-SM-5986T
60-69 years, female
151.1
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
151.0
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
150.6
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
146.8
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
140.2
GTEX-13112-1426-SM-5EGH8
50-59 years, male
134.9
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
133.3
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
133.1
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
132.6
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
131.9
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
128.9
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
126.9
GTEX-1399T-0826-SM-5IFES
60-69 years, male
121.0
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
117.0
GTEX-P78B-1326-SM-3P611
40-49 years, female
115.6
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
114.9
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
114.8
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
114.4
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
111.1
GTEX-QEL4-1226-SM-447A4
50-59 years, male
109.1
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
109.0
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
107.8
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
107.2
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
106.1
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
105.3
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
105.3
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
105.1
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
105.0
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
97.5
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
96.5
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
95.1
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
94.4
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
92.0
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
88.9
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
88.2
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
88.0
GTEX-X261-1726-SM-4PQYT
50-59 years, male
86.4
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
83.6
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
78.2
GTEX-RU72-1426-SM-46MUF
50-59 years, female
78.2
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
77.4
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
77.4
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
76.9
GTEX-Q734-0326-SM-48U15
40-49 years, female
76.5
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
75.0
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
75.0
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
72.9
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
71.6
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
69.0
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
68.4
GTEX-R53T-0326-SM-48FEC
50-59 years, female
67.4
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
66.1
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
63.7
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
62.0
GTEX-11ZUS-2526-SM-59872
30-39 years, male
61.1
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
61.0
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
59.6
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
58.4
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
52.4
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
51.8
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
51.6
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
51.4
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
45.1
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
43.8
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
43.0
GTEX-S32W-1926-SM-4AD63
50-59 years, female
39.7
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
36.1
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
35.1
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
34.3
GTEX-QESD-2026-SM-447BI
20-29 years, male
33.8
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
31.8
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
29.1
GTEX-S33H-1626-SM-4AD68
30-39 years, male
22.8
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
21.8
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
18.1
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
9.2
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
