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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 56.4
Min RPKM: 7.9
Std RPKM: 8.3
Median RPKM: 25.5
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
56.4
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
40.8
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
38.1
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
37.7
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
36.5
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
36.3
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
34.9
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
33.1
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
32.5
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
32.2
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
31.5
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
31.3
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
30.9
GTEX-11P82-0926-SM-5986X
20-29 years, male
30.4
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
29.4
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
29.0
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
28.9
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
28.6
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
28.5
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
28.1
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
27.7
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
27.7
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
27.7
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
27.3
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
26.4
GTEX-13113-1526-SM-5EGHV
60-69 years, female
26.0
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
25.7
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
25.5
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
25.5
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
24.6
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
24.1
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
23.5
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
23.3
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
23.3
GTEX-Y111-2626-SM-4TT24
50-59 years, male
22.8
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
22.7
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
21.9
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
21.5
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
21.1
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
20.9
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
20.8
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
20.5
GTEX-1445S-2926-SM-5O993
60-69 years, male
20.2
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
20.1
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
19.5
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
19.0
GTEX-X261-2426-SM-4PQZU
50-59 years, male
18.9
GTEX-13O21-1926-SM-5MR39
50-59 years, male
18.0
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
17.6
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
17.4
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
16.6
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
14.8
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
13.4
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
11.6
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
11.3
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
10.9
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
7.9
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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