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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 199.9
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 145.3
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 84.7
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 191.7
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 321.2
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 224.7
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 208.4
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 376.4
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 327.6
Min RPKM: 29.9
Std RPKM: 67.1
Median RPKM: 97.8
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
327.6
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
303.5
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
291.5
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
289.6
GTEX-YECK-1926-SM-4W21H
60-69 years, male
289.0
GTEX-11GSP-0626-SM-5986T
60-69 years, female
272.0
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
266.6
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
260.6
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
228.7
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
225.5
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
215.8
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
215.4
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
214.5
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
210.8
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
205.2
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
196.7
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
196.5
GTEX-REY6-1226-SM-48FDR
60-69 years, male
192.4
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
188.9
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
183.3
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
180.1
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
169.1
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
166.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
166.7
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
166.1
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
164.8
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
164.6
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
159.4
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
157.6
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
157.6
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
152.0
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
144.5
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
142.6
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
139.2
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
139.0
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
134.2
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
133.4
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
132.5
GTEX-QEL4-1226-SM-447A4
50-59 years, male
131.6
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
129.5
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
129.5
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
127.2
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
124.6
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
124.5
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
122.5
GTEX-13112-1426-SM-5EGH8
50-59 years, male
122.4
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
121.9
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
121.1
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
120.6
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
113.1
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
111.2
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
106.1
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
105.8
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
105.0
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
103.8
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
99.5
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
98.8
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
98.6
GTEX-1399T-0826-SM-5IFES
60-69 years, male
98.5
GTEX-QESD-2026-SM-447BI
20-29 years, male
97.8
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
96.3
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
95.3
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
95.0
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
91.9
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
90.1
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
88.3
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
87.8
GTEX-S32W-1926-SM-4AD63
50-59 years, female
87.3
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
86.2
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
81.8
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
80.8
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
80.3
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
80.0
GTEX-RU72-1426-SM-46MUF
50-59 years, female
79.0
GTEX-RN64-1826-SM-48FDV
50-59 years, male
78.7
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
77.5
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
77.1
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
76.1
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
75.6
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
75.0
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
74.5
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
73.4
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
70.0
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
69.8
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
69.7
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
69.4
GTEX-S33H-1626-SM-4AD68
30-39 years, male
69.1
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
67.0
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
66.2
GTEX-13113-1326-SM-5GCOI
60-69 years, female
62.8
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
62.5
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
62.3
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
61.6
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
60.4
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
58.9
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
57.8
GTEX-Q734-0326-SM-48U15
40-49 years, female
57.5
GTEX-11ZUS-2526-SM-59872
30-39 years, male
57.2
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
56.3
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
55.7
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
54.9
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
54.1
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
53.8
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
53.6
GTEX-12696-0826-SM-5EGGE
60-69 years, male
52.6
GTEX-X261-1726-SM-4PQYT
50-59 years, male
52.1
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
50.9
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
50.8
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
50.8
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
50.4
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
50.3
GTEX-R53T-0326-SM-48FEC
50-59 years, female
49.1
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
47.6
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
47.5
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
42.4
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
41.2
GTEX-P78B-1326-SM-3P611
40-49 years, female
39.1
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
36.6
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
29.9
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
