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ID2
COLON - Expression summary
RNA expressioni
HPA:113.5TPM
GTEx:57.0RPKM
FANTOM5:331.2Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 113.5
overview Male, age 54 Sample 1
TPM: 106
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 102.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 92.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 142
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 64.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 155.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 71.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 117.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 149.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 125.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 149.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 138.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 60.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 57.0
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 65.7
Samples: 149

Max RPKM: 198.8
Min RPKM: 11.8
Std RPKM: 28.9
Median RPKM: 61.5
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 198.8
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 139.8
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 138.4
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 134.3
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 134.0
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 128.7
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 123.5
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 122.2
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 116.6
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 111.9
Show all
Colon - Transverse
RPKM: 50.5
Samples: 196

Max RPKM: 875.7
Min RPKM: 16.6
Std RPKM: 61.7
Median RPKM: 41.7
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 875.7
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 105.7
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 101.3
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 94.9
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 94.8
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 93.1
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 89.5
GTEX-Y114-1526-SM-4TT79 50-59 years, female 86.2
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 85.2
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 80.7
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 331.2
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 435.0
FF:10014-101C5 62,83,84 years, mixed 331.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.