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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 409.1
Min RPKM: 182.2
Std RPKM: 53.2
Median RPKM: 286.6
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
409.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
399.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
399.2
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
397.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
396.2
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
392.4
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
380.2
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
376.3
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
375.2
GTEX-QV31-0126-SM-447BP
30-39 years, male
369.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
366.6
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
366.5
GTEX-QLQW-0126-SM-447BK
30-39 years, male
361.2
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
361.2
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
360.9
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
359.0
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
351.7
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
346.4
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
342.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
338.3
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
338.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
337.0
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
335.2
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
335.0
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
331.8
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
331.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
331.0
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
330.3
GTEX-QCQG-0226-SM-48U28
50-59 years, female
325.1
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
320.1
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
317.6
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
316.2
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
315.6
GTEX-144GN-2126-SM-5O99D
50-59 years, male
314.9
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
314.4
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
314.1
GTEX-R55G-0226-SM-48FEI
40-49 years, female
313.5
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
308.5
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
305.6
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
303.5
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
302.7
GTEX-PX3G-0926-SM-48U12
20-29 years, female
302.4
GTEX-X585-1826-SM-4QAS3
50-59 years, male
302.3
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
300.5
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
300.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
299.2
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
296.2
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
295.4
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
294.0
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
291.6
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
288.2
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
287.5
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
285.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
283.4
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
280.5
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
280.4
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
278.7
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
276.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
275.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
274.8
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
270.0
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
270.0
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
267.3
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
267.3
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
263.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
262.7
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
262.4
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
261.8
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
261.7
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
261.1
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
260.4
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
259.7
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
258.4
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
256.8
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
256.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
255.7
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
254.6
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
253.0
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
252.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
251.7
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
250.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
247.2
GTEX-13111-0126-SM-5EGHO
50-59 years, male
246.5
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
246.4
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
245.1
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
241.3
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
241.0
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
237.3
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
237.2
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
236.0
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
233.3
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
226.6
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
224.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
224.3
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
223.1
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
219.2
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
218.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
214.3
GTEX-Q734-0226-SM-48U1A
40-49 years, female
212.9
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
212.1
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
200.7
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
199.2
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
190.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
182.2
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.