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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 956.5
Min RPKM: 316.0
Std RPKM: 119.7
Median RPKM: 457.0
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
956.5
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
806.8
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
748.2
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
734.4
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
728.6
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
715.0
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
713.6
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
704.5
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
699.6
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
690.7
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
670.4
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
647.0
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
643.5
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
640.9
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
635.9
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
635.2
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
566.0
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
557.9
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
556.6
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
540.8
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
534.6
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
530.0
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
527.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
522.5
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
513.7
GTEX-RU72-2226-SM-46MUE
50-59 years, female
513.1
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
511.9
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
510.1
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
509.7
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
508.7
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
508.0
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
504.4
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
503.5
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
502.6
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
501.3
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
496.4
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
493.8
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
485.8
GTEX-S32W-1226-SM-4AD67
50-59 years, female
480.0
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
479.9
GTEX-P78B-1926-SM-3P616
40-49 years, female
477.2
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
476.4
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
475.0
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
473.9
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
470.6
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
470.0
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
466.5
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
458.2
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
457.0
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
454.1
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
452.7
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
451.8
GTEX-11I78-1926-SM-59878
50-59 years, female
451.6
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
444.5
GTEX-S341-0726-SM-4AD5R
40-49 years, female
444.4
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
443.9
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
436.2
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
435.3
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
434.9
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
431.7
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
429.9
GTEX-QCQG-1426-SM-48U22
50-59 years, female
429.1
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
427.6
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
425.5
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
425.1
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
424.6
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
422.9
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
421.2
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
415.3
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
414.9
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
406.1
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
402.8
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
399.8
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
399.6
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
397.8
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
397.3
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
394.3
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
391.9
GTEX-Q734-0726-SM-48TZP
40-49 years, female
386.6
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
385.9
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
384.4
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
384.0
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
383.3
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
376.9
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
375.5
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
367.9
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
357.7
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
355.2
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
354.7
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
353.4
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
350.3
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
341.7
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
331.6
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
328.2
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
322.9
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
322.2
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
316.0
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.