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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 336.8
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 366.2
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 195.3
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 392.7
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 462.2
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 326.1
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 360.5
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 335.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 348.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 389.7
Min RPKM: 116.7
Std RPKM: 55.8
Median RPKM: 254.7
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
389.7
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
368.7
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
366.3
GTEX-13112-0226-SM-5P9IV
50-59 years, male
362.3
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
359.0
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
358.7
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
357.5
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
356.1
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
346.4
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
345.0
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
344.0
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
343.9
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
341.4
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
341.1
GTEX-Y111-2426-SM-4TT23
50-59 years, male
337.3
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
335.2
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
334.9
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
333.7
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
326.2
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
323.4
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
321.5
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
320.2
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
320.1
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
317.3
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
316.1
GTEX-117XS-2026-SM-5GID1
60-69 years, male
313.6
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
313.6
GTEX-REY6-0126-SM-48FDT
60-69 years, male
311.6
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
309.3
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
309.2
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
308.6
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
307.3
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
306.0
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
301.6
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
300.1
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
299.9
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
297.0
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
296.8
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
295.0
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
292.9
GTEX-11DXZ-2126-SM-59881
50-59 years, male
292.8
GTEX-11OF3-1826-SM-5987N
60-69 years, male
289.9
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
289.1
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
288.3
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
287.2
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
287.2
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
286.4
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
286.0
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
285.8
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
285.4
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
285.3
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
284.7
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
282.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
281.5
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
281.3
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
277.9
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
276.7
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
276.5
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
276.1
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
275.7
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
275.1
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
274.9
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
274.3
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
274.2
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
273.6
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
272.1
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
271.0
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
270.1
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
269.9
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
269.3
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
268.9
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
268.4
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
267.3
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
264.2
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
264.1
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
263.3
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
262.1
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
260.7
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
260.2
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
259.5
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
259.5
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
257.4
GTEX-13111-1526-SM-5EGJX
50-59 years, male
257.2
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
256.0
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
255.7
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
255.4
GTEX-12696-0226-SM-5EGL3
60-69 years, male
254.1
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
253.3
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
252.2
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
251.8
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
247.7
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
247.6
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
246.8
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
246.7
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
245.6
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
244.5
GTEX-QLQW-1026-SM-447A9
30-39 years, male
243.9
GTEX-S95S-1126-SM-4B64E
60-69 years, male
241.8
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
241.4
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
240.4
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
239.4
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
238.6
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
238.3
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
237.6
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
237.0
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
236.7
GTEX-V955-1926-SM-4KL1L
60-69 years, male
235.5
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
235.3
GTEX-R55D-0126-SM-48FEL
50-59 years, male
234.5
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
234.3
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
234.3
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
234.3
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
234.2
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
234.0
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
233.6
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
233.5
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
233.1
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
230.0
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
226.6
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
222.4
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
221.9
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
221.9
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
221.5
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
221.4
GTEX-X261-2326-SM-4PQYU
50-59 years, male
221.1
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
221.0
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
220.3
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
218.8
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
218.7
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
218.4
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
215.1
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
214.5
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
212.5
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
210.9
GTEX-R55C-1426-SM-48FED
40-49 years, male
208.3
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
207.3
GTEX-S33H-0126-SM-4AD62
30-39 years, male
206.5
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
205.3
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
204.6
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
203.9
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
202.8
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
202.7
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
202.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
198.4
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
197.7
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
194.6
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
193.9
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
192.8
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
190.7
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
190.2
GTEX-XPT6-1626-SM-4B655
20-29 years, male
189.7
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
189.2
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
186.0
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
183.0
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
178.4
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
175.1
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
173.8
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
171.8
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
170.9
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
164.4
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
164.3
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
161.6
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
160.8
GTEX-RN64-2326-SM-48FDW
50-59 years, male
158.3
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
157.5
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
155.4
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
151.3
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
146.8
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
146.1
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
135.9
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
120.7
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
116.7
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.