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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 166.0
Min RPKM: 25.3
Std RPKM: 26.4
Median RPKM: 79.6
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
166.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
145.0
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
136.9
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
133.6
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
132.4
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
127.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
122.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
121.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
120.4
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
119.7
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
118.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
115.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
110.8
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
109.5
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
108.9
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
108.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
107.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
107.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
106.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
106.1
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
105.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
102.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
101.0
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
100.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
99.5
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
98.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
97.5
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
94.2
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
93.6
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
93.1
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
92.9
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
92.7
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
92.5
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
91.7
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
90.8
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
90.7
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
89.5
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
89.0
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
87.9
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
87.9
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
87.2
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
86.7
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
86.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
82.5
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
80.6
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
80.1
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
79.7
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
79.4
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
78.1
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
76.6
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
76.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
75.5
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
74.4
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
74.1
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
73.2
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
73.2
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
72.8
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
71.8
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
71.7
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
71.3
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
70.2
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
69.9
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
69.0
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
68.7
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
68.6
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
68.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
67.1
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
66.8
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
66.1
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
65.6
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
65.1
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
63.7
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
62.4
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
61.8
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
60.2
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
60.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
58.8
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
58.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
58.5
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
58.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
57.3
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
55.9
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
55.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
55.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
53.6
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
52.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
48.3
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
48.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
45.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
42.8
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
38.7
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
34.6
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
29.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
25.3
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.