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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 350.7
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 309.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 701.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 693.0
Min RPKM: 102.8
Std RPKM: 75.1
Median RPKM: 196.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
693.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
558.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
531.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
457.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
453.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
379.0
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
354.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
350.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
349.1
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
348.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
338.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
314.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
310.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
305.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
301.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
300.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
297.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
295.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
294.7
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
291.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
290.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
288.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
287.2
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
286.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
284.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
276.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
270.7
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
268.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
268.6
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
265.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
265.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
262.7
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
261.9
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
260.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
258.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
258.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
257.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
256.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
254.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
251.8
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
248.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
246.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
244.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
243.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
243.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
239.5
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
238.9
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
237.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
236.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
235.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
235.7
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
235.3
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
235.1
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
232.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
231.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
229.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
228.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
226.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
225.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
225.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
225.3
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
224.8
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
224.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
223.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
222.8
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
222.4
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
222.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
220.2
GTEX-S341-1526-SM-4AD6K
40-49 years, female
220.0
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
219.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
217.7
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
216.8
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
216.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
215.7
GTEX-117YX-1426-SM-5H12H
50-59 years, male
214.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
213.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
213.4
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
213.1
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
212.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
211.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
211.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
211.1
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
210.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
208.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
207.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
206.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
206.4
GTEX-1122O-1226-SM-5H113
60-69 years, female
206.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
206.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
205.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
205.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
205.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
204.9
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
204.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
204.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
203.6
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
203.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
201.3
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
201.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
200.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
199.6
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
199.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
198.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
197.9
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
197.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
197.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
197.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
196.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
196.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
196.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
195.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
194.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
194.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
193.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
193.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
193.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
192.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
192.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
192.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
188.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
188.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
188.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
187.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
186.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
186.2
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
185.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
184.7
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
183.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
183.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
182.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
181.9
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
181.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
181.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
180.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
180.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
179.9
GTEX-REY6-2426-SM-48FF5
60-69 years, male
179.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
178.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
176.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
175.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
175.7
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
174.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
174.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
173.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
172.2
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
170.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
170.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
170.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
169.5
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
168.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
166.9
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
166.8
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
166.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
166.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
166.3
GTEX-11OF3-1926-SM-59889
60-69 years, male
165.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
164.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
164.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
164.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
163.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
162.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
159.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
158.6
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
157.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
157.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
155.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
155.1
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
154.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
154.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
153.3
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
153.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
152.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
151.8
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
151.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
151.2
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
149.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
149.0
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
148.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
147.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
146.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
146.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
146.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
146.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
146.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
142.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
141.5
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
141.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
141.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
140.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
139.9
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
138.7
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
138.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
137.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
135.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
134.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
130.6
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
129.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
129.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
128.7
GTEX-R55D-0826-SM-48FEA
50-59 years, male
128.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
126.1
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
125.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
124.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
124.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
122.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
122.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
119.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
115.2
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
115.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
114.7
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
113.7
GTEX-R53T-1526-SM-48FEK
50-59 years, female
107.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
103.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
102.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.