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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 483.6
Min RPKM: 223.0
Std RPKM: 55.7
Median RPKM: 331.2
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
483.6
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
463.9
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
458.0
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
446.2
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
440.9
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
435.3
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
430.6
GTEX-R55G-0226-SM-48FEI
40-49 years, female
424.0
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
418.6
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
415.4
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
414.4
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
412.3
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
402.3
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
401.6
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
397.0
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
396.9
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
395.7
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
392.9
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
389.9
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
388.5
GTEX-X585-1826-SM-4QAS3
50-59 years, male
384.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
383.4
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
380.0
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
379.5
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
378.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
377.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
375.0
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
374.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
373.0
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
367.7
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
366.3
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
366.0
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
363.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
362.6
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
362.5
GTEX-QV31-0126-SM-447BP
30-39 years, male
362.0
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
360.2
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
359.8
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
359.0
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
355.2
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
353.2
GTEX-QCQG-0226-SM-48U28
50-59 years, female
352.8
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
349.3
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
344.1
GTEX-QLQW-0126-SM-447BK
30-39 years, male
340.6
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
340.6
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
339.0
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
337.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
335.9
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
333.0
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
331.9
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
331.4
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
330.9
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
330.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
330.2
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
330.1
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
329.8
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
328.5
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
326.6
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
325.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
323.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
321.7
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
317.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
314.7
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
314.4
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
313.9
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
313.7
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
311.7
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
307.1
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
303.4
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
302.8
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
301.8
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
301.0
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
294.6
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
294.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
293.5
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
293.1
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
292.2
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
290.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
290.5
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
289.5
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
287.5
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
287.0
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
286.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
286.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
280.4
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
278.6
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
275.8
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
274.0
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
273.4
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
272.5
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
271.9
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
270.7
GTEX-Q734-0226-SM-48U1A
40-49 years, female
269.9
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
269.9
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
264.8
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
262.5
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
261.4
GTEX-13111-0126-SM-5EGHO
50-59 years, male
258.0
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
245.3
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
244.9
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
242.5
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
242.0
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
223.0
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.