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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 413.7
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 266.5
Min RPKM: 100.3
Std RPKM: 33.3
Median RPKM: 151.5
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
266.5
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
265.8
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
246.7
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
243.7
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
236.7
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
236.7
GTEX-144FL-3026-SM-5O99C
50-59 years, male
230.6
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
223.5
GTEX-X585-3026-SM-46MWF
50-59 years, male
220.2
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
218.3
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
215.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
213.7
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
210.3
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
208.9
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
208.2
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
206.5
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
202.6
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
200.6
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
188.9
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
188.8
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
184.3
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
184.3
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
183.8
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
179.8
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
179.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
178.9
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
176.8
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
175.2
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
173.1
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
172.9
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
171.8
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
170.4
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
169.3
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
168.9
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
168.7
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
168.0
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
164.8
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
164.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
162.4
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
162.3
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
161.7
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
160.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
160.5
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
160.5
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
159.4
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
159.2
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
157.9
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
155.9
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
155.7
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
155.4
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
154.3
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
154.1
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
153.7
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
153.6
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
152.9
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
151.9
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
151.7
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
151.2
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
149.9
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
149.6
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
149.0
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
149.0
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
148.8
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
147.5
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
147.5
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
147.4
GTEX-1128S-2726-SM-5H12C
60-69 years, female
147.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
146.5
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
146.4
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
146.0
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
144.6
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
144.1
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
143.7
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
143.4
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
143.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
143.0
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
142.3
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
142.0
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
142.0
GTEX-11PRG-2926-SM-5987A
50-59 years, male
141.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
141.3
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
141.1
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
141.0
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
140.0
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
139.2
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
139.1
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
138.3
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
138.2
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
138.1
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
137.6
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
137.6
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
137.5
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
137.1
GTEX-WL46-2926-SM-3LK82
50-59 years, male
136.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
136.5
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
136.3
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
136.0
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
135.5
GTEX-11GSP-3226-SM-5986O
60-69 years, female
135.0
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
134.4
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
133.9
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
133.9
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
128.7
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
126.8
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
126.4
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
122.8
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
120.1
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
119.9
GTEX-145MF-2726-SM-5O995
50-59 years, male
119.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
119.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
119.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
117.5
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
109.0
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
100.3
Show all
Brain - Frontal Cortex (BA9) RPKM: 179.8
Samples: 108
Max RPKM: 353.3
Min RPKM: 100.3
Std RPKM: 43.0
Median RPKM: 170.3
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
353.3
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
310.0
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
291.0
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
290.0
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
274.2
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
257.3
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
252.3
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
244.4
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
243.7
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
243.6
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
238.3
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
235.1
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
233.2
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
226.2
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
224.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
224.1
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
223.9
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
223.5
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
221.6
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
221.4
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
220.8
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
217.7
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
210.9
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
207.3
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
202.2
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
201.8
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
201.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
196.8
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
194.2
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
193.6
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
190.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
189.3
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
185.3
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
185.0
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
184.5
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
184.1
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
183.3
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
181.0
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
181.0
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
180.4
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
180.1
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
179.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
178.7
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
178.6
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
177.8
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
177.2
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
177.0
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
176.5
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
173.8
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
173.7
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
173.4
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
171.8
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
171.8
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
170.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
170.1
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
169.0
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
168.3
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
167.0
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
166.8
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
165.7
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
165.5
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
164.9
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
163.9
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
163.7
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
163.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
162.8
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
161.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
160.8
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
160.5
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
160.1
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
159.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
158.2
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
158.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
158.1
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
155.8
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
155.7
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
155.4
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
155.1
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
154.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
153.4
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
153.2
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
153.1
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
152.6
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
152.3
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
150.2
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
149.1
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
148.8
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
147.2
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
145.2
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
144.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
144.0
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
143.8
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
141.8
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
139.8
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
139.8
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
137.6
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
137.6
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
137.1
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
136.6
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
132.5
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
132.5
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
127.7
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
126.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
122.9
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
118.6
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
111.4
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
110.2
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
100.3
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.