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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 642.0
Min RPKM: 12.4
Std RPKM: 98.9
Median RPKM: 76.0
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
642.0
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
441.1
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
380.8
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
362.2
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
345.6
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
264.9
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
237.2
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
236.2
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
223.4
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
211.5
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
209.0
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
189.9
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
186.5
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
178.7
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
169.6
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
164.3
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
149.5
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
147.5
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
143.0
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
140.5
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
135.3
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
133.7
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
126.5
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
125.7
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
120.5
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
120.5
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
117.2
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
115.1
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
114.8
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
110.3
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
106.7
GTEX-S341-1226-SM-4AD5S
40-49 years, female
105.3
GTEX-QCQG-1226-SM-48U23
50-59 years, female
101.9
GTEX-11I78-2026-SM-5987C
50-59 years, female
100.9
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
99.6
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
99.1
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
94.9
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
91.6
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
87.8
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
86.4
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
85.0
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
84.6
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
84.4
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
81.4
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
81.0
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
79.5
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
79.0
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
77.2
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
74.8
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
73.9
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
73.5
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
73.1
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
72.8
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
71.7
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
69.9
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
69.5
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
68.0
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
65.1
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
63.6
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
62.2
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
59.7
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
58.8
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
50.0
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
49.4
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
48.7
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
48.6
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
42.7
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
42.3
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
42.3
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
41.2
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
41.1
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
40.5
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
38.8
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
38.2
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
38.2
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
36.6
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
36.6
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
35.9
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
34.7
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
34.3
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
31.5
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
31.1
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
31.0
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
29.9
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
28.2
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
27.2
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
26.6
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
25.0
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
23.5
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
20.3
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
18.8
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
18.7
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
18.0
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
17.2
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
14.5
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
12.4
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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