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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 900.1
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 817.1
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 1794.5
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 850.1
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 718.7
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 617.8
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 225.4
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 791.2
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 396
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 488.3
Min RPKM: 51.7
Std RPKM: 86.5
Median RPKM: 247.2
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
488.3
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
483.0
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
472.9
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
471.5
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
457.8
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
447.6
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
435.2
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
426.9
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
420.7
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
418.2
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
410.9
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
399.4
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
396.8
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
381.7
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
381.5
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
378.0
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
363.8
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
361.0
GTEX-S33H-0126-SM-4AD62
30-39 years, male
358.8
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
357.7
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
356.5
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
353.5
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
347.6
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
343.5
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
342.6
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
340.8
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
337.7
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
337.0
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
334.2
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
331.0
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
329.8
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
328.1
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
326.0
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
325.7
GTEX-R55C-1426-SM-48FED
40-49 years, male
324.0
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
323.4
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
320.1
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
316.9
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
315.9
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
315.6
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
311.5
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
308.6
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
305.9
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
303.6
GTEX-XPT6-1626-SM-4B655
20-29 years, male
303.4
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
299.9
GTEX-RN64-2326-SM-48FDW
50-59 years, male
295.7
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
293.7
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
293.2
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
292.5
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
289.8
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
288.7
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
287.5
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
287.0
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
285.8
GTEX-R55D-0126-SM-48FEL
50-59 years, male
285.3
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
282.7
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
281.8
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
281.8
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
280.6
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
278.0
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
276.7
GTEX-V955-1926-SM-4KL1L
60-69 years, male
275.9
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
275.8
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
273.2
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
273.0
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
272.7
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
270.3
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
269.5
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
267.9
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
266.3
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
265.6
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
265.3
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
265.0
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
264.8
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
263.6
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
261.4
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
259.8
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
259.8
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
257.0
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
253.8
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
253.2
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
250.5
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
250.0
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
249.9
GTEX-QLQW-1026-SM-447A9
30-39 years, male
247.4
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
247.0
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
246.7
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
245.5
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
245.0
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
244.5
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
244.0
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
244.0
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
243.1
GTEX-11DXZ-2126-SM-59881
50-59 years, male
241.7
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
240.6
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
240.2
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
237.1
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
235.9
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
235.2
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
232.8
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
232.2
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
230.7
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
227.5
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
226.6
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
224.9
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
223.2
GTEX-13111-1526-SM-5EGJX
50-59 years, male
222.4
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
221.2
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
220.2
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
219.3
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
218.9
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
217.9
GTEX-X261-2326-SM-4PQYU
50-59 years, male
215.6
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
215.0
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
213.8
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
213.6
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
212.8
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
211.2
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
209.0
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
207.6
GTEX-12696-0226-SM-5EGL3
60-69 years, male
207.3
GTEX-117XS-2026-SM-5GID1
60-69 years, male
199.1
GTEX-S95S-1126-SM-4B64E
60-69 years, male
197.6
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
197.3
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
195.8
GTEX-REY6-0126-SM-48FDT
60-69 years, male
195.7
GTEX-11OF3-1826-SM-5987N
60-69 years, male
195.1
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
193.9
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
190.5
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
190.3
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
189.0
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
187.6
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
186.8
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
183.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
182.9
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
178.1
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
178.1
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
175.7
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
175.2
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
170.8
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
169.5
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
168.9
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
168.6
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
168.2
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
165.4
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
164.7
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
164.0
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
162.9
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
161.3
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
160.5
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
159.6
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
159.2
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
158.6
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
153.6
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
152.3
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
149.6
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
149.5
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
148.2
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
137.3
GTEX-Y111-2426-SM-4TT23
50-59 years, male
136.2
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
135.0
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
131.1
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
126.2
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
115.0
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
111.2
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
103.8
GTEX-13112-0226-SM-5P9IV
50-59 years, male
103.4
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
85.2
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
83.8
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
66.0
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
51.7
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.