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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 427.7
Min RPKM: 82.5
Std RPKM: 78.4
Median RPKM: 164.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
427.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
411.3
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
391.1
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
385.8
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
383.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
379.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
357.9
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
343.7
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
334.6
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
323.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
318.7
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
302.2
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
279.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
279.1
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
278.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
274.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
273.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
264.6
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
257.8
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
256.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
255.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
247.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
244.2
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
243.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
238.7
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
236.2
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
235.1
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
232.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
232.0
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
229.3
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
227.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
224.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
219.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
216.7
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
210.3
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
209.2
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
207.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
206.1
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
205.3
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
201.7
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
201.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
200.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
200.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
200.1
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
196.9
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
187.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
186.0
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
183.2
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
182.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
181.3
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
179.3
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
176.5
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
170.7
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
167.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
166.8
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
166.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
165.1
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
165.0
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
164.7
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
164.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
163.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
163.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
163.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
162.9
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
162.6
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
159.9
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
159.9
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
159.2
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
157.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
157.4
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
157.2
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
155.8
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
155.5
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
155.4
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
154.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
153.5
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
153.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
153.3
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
151.3
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
146.1
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
145.8
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
145.7
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
143.8
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
143.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
141.1
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
138.7
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
136.2
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
129.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
125.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
125.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
124.9
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
123.3
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
122.2
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
121.5
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
120.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
118.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
114.6
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
114.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
111.4
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
111.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
109.0
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
107.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
104.7
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
104.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
101.1
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
100.2
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
99.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
96.5
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
94.6
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
93.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
92.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
92.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
89.7
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
87.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
85.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
82.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
82.5
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.