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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 645.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 41.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 131.8
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1331.6
Min RPKM: 105.6
Std RPKM: 241.9
Median RPKM: 348.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
1331.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
1165.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
1099.0
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
1098.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
1077.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
1069.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
1023.6
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
1021.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
1002.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
987.4
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
973.9
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
926.1
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
898.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
898.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
866.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
842.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
842.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
811.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
801.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
799.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
776.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
747.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
738.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
730.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
724.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
722.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
711.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
704.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
686.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
680.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
668.0
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
649.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
641.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
640.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
628.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
625.0
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
622.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
620.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
618.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
608.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
601.9
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
599.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
582.9
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
579.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
559.4
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
549.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
548.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
547.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
544.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
536.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
535.9
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
535.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
533.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
533.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
527.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
523.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
522.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
514.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
509.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
507.2
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
503.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
499.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
498.8
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
498.2
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
485.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
480.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
477.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
467.5
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
465.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
464.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
462.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
462.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
460.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
459.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
456.3
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
452.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
446.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
444.4
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
439.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
439.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
437.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
436.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
434.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
429.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
424.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
417.4
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
416.2
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
408.8
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
401.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
397.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
397.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
396.8
GTEX-XBED-1626-SM-47JYN
60-69 years, male
393.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
392.2
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
387.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
380.5
GTEX-117YX-1426-SM-5H12H
50-59 years, male
380.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
377.4
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
377.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
366.2
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
362.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
362.0
GTEX-1122O-1226-SM-5H113
60-69 years, female
361.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
359.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
354.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
350.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
349.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
348.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
347.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
342.9
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
341.4
GTEX-X261-0626-SM-3NMD9
50-59 years, male
339.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
332.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
331.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
329.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
326.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
326.3
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
321.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
321.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
316.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
315.3
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
312.4
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
309.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
308.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
307.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
303.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
299.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
297.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
297.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
293.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
292.0
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
289.8
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
289.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
289.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
288.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
284.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
279.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
279.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
276.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
276.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
273.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
269.9
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
269.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
266.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
265.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
264.5
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
259.7
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
256.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
255.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
254.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
254.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
253.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
250.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
246.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
246.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
245.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
244.5
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
239.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
239.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
239.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
235.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
235.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
233.5
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
232.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
231.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
230.3
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
229.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
227.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
211.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
207.2
GTEX-S341-1526-SM-4AD6K
40-49 years, female
206.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
205.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
204.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
202.4
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
201.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
201.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
198.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
196.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
195.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
194.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
192.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
192.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
188.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
186.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
182.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
181.4
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
180.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
180.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
178.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
176.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
174.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
172.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
169.5
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
167.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
166.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
162.5
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
162.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
160.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
156.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
153.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
152.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
151.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
150.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
149.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
149.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
149.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
142.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
140.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
136.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
127.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
126.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
115.4
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
109.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
105.6
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.