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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 118.4
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 189.7
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 171.5
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 206.5
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 173.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 129.9
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 121.7
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 160.8
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 116.5
Min RPKM: 5.6
Std RPKM: 17.0
Median RPKM: 40.1
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
116.5
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
101.0
GTEX-S32W-1926-SM-4AD63
50-59 years, female
90.0
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
84.4
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
80.5
GTEX-QESD-2026-SM-447BI
20-29 years, male
75.4
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
73.9
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
71.9
GTEX-QEL4-1226-SM-447A4
50-59 years, male
70.2
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
69.8
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
68.1
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
67.9
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
67.5
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
65.4
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
63.3
GTEX-13113-1326-SM-5GCOI
60-69 years, female
62.4
GTEX-REY6-1226-SM-48FDR
60-69 years, male
59.7
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
58.8
GTEX-RU72-1426-SM-46MUF
50-59 years, female
58.7
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
57.2
GTEX-P78B-1326-SM-3P611
40-49 years, female
56.9
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
55.6
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
54.8
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
50.6
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
50.4
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
50.1
GTEX-YECK-1926-SM-4W21H
60-69 years, male
49.6
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
49.0
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
48.5
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
48.3
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
48.1
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
48.1
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
47.4
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
47.1
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
47.1
GTEX-S33H-1626-SM-4AD68
30-39 years, male
46.6
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
46.5
GTEX-R53T-0326-SM-48FEC
50-59 years, female
46.1
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
45.4
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
45.3
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
45.2
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
44.9
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
44.7
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
44.1
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
44.1
GTEX-12696-0826-SM-5EGGE
60-69 years, male
43.9
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
43.8
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
42.9
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
42.4
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
42.2
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
41.6
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
41.3
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
40.9
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
40.9
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
40.6
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
40.4
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
40.2
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
40.2
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
40.2
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
40.1
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
40.0
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
39.9
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
39.8
GTEX-1399T-0826-SM-5IFES
60-69 years, male
39.4
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
39.4
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
39.1
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
39.0
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
39.0
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
38.7
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
38.6
GTEX-Q734-0326-SM-48U15
40-49 years, female
38.4
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
37.9
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
37.8
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
37.6
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
37.0
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
36.6
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
35.9
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
35.6
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
35.4
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
35.4
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
35.3
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
35.0
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
34.1
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
34.1
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
33.9
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
33.9
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
33.6
GTEX-X261-1726-SM-4PQYT
50-59 years, male
33.4
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
33.2
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
33.1
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
31.8
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
30.5
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
30.2
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
30.2
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
29.5
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
29.3
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
29.2
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
28.8
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
28.8
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
28.4
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
27.6
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
27.3
GTEX-13112-1426-SM-5EGH8
50-59 years, male
27.2
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
26.7
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
26.4
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
26.4
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
25.3
GTEX-RN64-1826-SM-48FDV
50-59 years, male
24.3
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
23.8
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
23.8
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
23.7
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
23.2
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
23.1
GTEX-11GSP-0626-SM-5986T
60-69 years, female
22.9
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
22.3
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
22.1
GTEX-11ZUS-2526-SM-59872
30-39 years, male
18.5
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
17.4
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
5.6
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
