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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 855.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 903.8
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 1260.1
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 678.3
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 733.4
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 896.1
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 710.5
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 879.7
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 780.7
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1136.4
Min RPKM: 321.8
Std RPKM: 97.1
Median RPKM: 464.7
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
1136.4
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
719.5
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
699.4
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
672.5
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
668.2
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
665.6
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
642.6
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
640.1
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
640.0
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
629.6
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
626.2
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
623.2
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
610.3
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
608.4
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
607.2
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
605.4
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
599.0
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
596.2
GTEX-R55C-1426-SM-48FED
40-49 years, male
596.0
GTEX-V955-1926-SM-4KL1L
60-69 years, male
588.1
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
585.6
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
585.6
GTEX-XPT6-1626-SM-4B655
20-29 years, male
580.6
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
580.5
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
572.0
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
570.3
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
569.7
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
564.0
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
563.8
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
562.1
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
556.9
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
554.5
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
554.3
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
550.1
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
545.4
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
542.4
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
534.2
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
533.8
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
533.0
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
532.9
GTEX-QLQW-1026-SM-447A9
30-39 years, male
531.4
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
529.6
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
528.4
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
522.0
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
521.5
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
521.2
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
520.4
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
518.7
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
517.3
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
516.8
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
514.5
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
513.0
GTEX-13112-0226-SM-5P9IV
50-59 years, male
511.5
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
508.9
GTEX-S33H-0126-SM-4AD62
30-39 years, male
508.3
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
508.2
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
507.5
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
505.8
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
504.8
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
502.9
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
501.7
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
499.7
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
499.5
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
497.6
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
497.3
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
495.6
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
495.5
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
495.0
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
494.9
GTEX-R55D-0126-SM-48FEL
50-59 years, male
493.9
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
492.8
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
492.5
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
491.5
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
486.6
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
481.4
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
480.8
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
480.6
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
476.6
GTEX-S95S-1126-SM-4B64E
60-69 years, male
475.7
GTEX-REY6-0126-SM-48FDT
60-69 years, male
475.5
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
475.4
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
469.4
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
468.0
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
467.3
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
465.5
GTEX-117XS-2026-SM-5GID1
60-69 years, male
464.8
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
464.7
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
463.7
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
462.4
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
461.9
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
459.7
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
459.4
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
457.8
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
453.2
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
451.5
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
450.2
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
444.9
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
444.6
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
444.5
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
444.2
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
440.6
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
439.8
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
438.2
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
437.4
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
437.2
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
437.1
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
436.5
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
436.2
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
435.3
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
433.1
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
433.1
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
431.9
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
429.4
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
427.1
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
426.3
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
424.9
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
422.5
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
421.8
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
421.0
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
419.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
419.7
GTEX-11OF3-1826-SM-5987N
60-69 years, male
419.4
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
417.8
GTEX-11DXZ-2126-SM-59881
50-59 years, male
417.4
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
414.8
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
414.7
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
414.2
GTEX-RN64-2326-SM-48FDW
50-59 years, male
413.9
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
412.9
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
412.3
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
411.2
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
410.9
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
409.6
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
409.5
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
408.8
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
408.7
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
407.7
GTEX-X261-2326-SM-4PQYU
50-59 years, male
406.0
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
404.8
GTEX-13111-1526-SM-5EGJX
50-59 years, male
404.6
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
402.8
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
401.3
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
399.4
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
397.8
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
397.4
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
396.5
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
396.4
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
396.1
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
394.6
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
392.8
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
389.6
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
386.5
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
386.3
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
376.3
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
375.4
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
365.0
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
364.0
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
361.7
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
361.7
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
361.2
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
360.3
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
359.2
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
358.7
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
353.6
GTEX-Y111-2426-SM-4TT23
50-59 years, male
350.4
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
347.8
GTEX-12696-0226-SM-5EGL3
60-69 years, male
347.1
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
337.1
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
334.7
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
334.0
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
326.3
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
321.8
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.