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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2124.1
Min RPKM: 725.9
Std RPKM: 292.0
Median RPKM: 1315.4
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
2124.1
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
2082.9
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
1965.3
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
1885.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
1862.4
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
1800.2
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
1791.7
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
1778.7
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
1769.3
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
1755.7
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
1699.1
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
1688.2
GTEX-144GN-2126-SM-5O99D
50-59 years, male
1672.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
1659.8
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
1645.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
1644.7
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
1628.3
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
1619.0
GTEX-R55G-0226-SM-48FEI
40-49 years, female
1610.9
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
1608.0
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
1606.8
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
1596.2
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
1590.2
GTEX-QCQG-0226-SM-48U28
50-59 years, female
1567.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
1567.0
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
1556.8
GTEX-QV31-0126-SM-447BP
30-39 years, male
1545.1
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
1529.3
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
1526.7
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
1523.9
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
1500.1
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
1496.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
1477.9
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
1452.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
1444.9
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
1422.9
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
1422.6
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
1418.5
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
1415.0
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
1410.9
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
1409.1
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
1400.9
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
1397.9
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
1383.8
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
1378.5
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
1354.2
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
1351.6
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
1347.7
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
1334.5
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
1330.7
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
1322.7
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
1322.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
1308.7
GTEX-QLQW-0126-SM-447BK
30-39 years, male
1301.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
1295.7
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
1283.8
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
1279.6
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
1265.9
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
1264.2
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
1254.2
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
1251.4
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
1242.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
1218.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
1204.8
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
1169.4
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
1160.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
1153.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
1151.1
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
1148.4
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
1131.8
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
1131.5
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
1128.9
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
1127.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
1126.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
1112.3
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
1100.4
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
1097.9
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
1096.7
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
1088.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
1079.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
1078.4
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
1075.7
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
1060.0
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
1056.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
1050.8
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
1039.1
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
1037.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
1037.2
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
1030.0
GTEX-13111-0126-SM-5EGHO
50-59 years, male
1013.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
1013.0
GTEX-X585-1826-SM-4QAS3
50-59 years, male
999.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
993.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
988.9
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
983.7
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
982.4
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
968.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
927.5
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
925.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
916.8
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
914.1
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
885.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
737.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
725.9
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.