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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1777.9
Min RPKM: 288.4
Std RPKM: 327.2
Median RPKM: 839.6
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
1777.9
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
1625.6
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
1619.0
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
1615.5
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
1546.3
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
1526.5
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
1451.5
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
1375.9
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
1314.4
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
1295.1
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
1281.2
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
1279.9
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
1235.3
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
1230.0
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
1225.5
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
1210.9
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
1209.5
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
1172.0
GTEX-13O61-1326-SM-5KM31
60-69 years, male
1157.8
GTEX-1192X-2526-SM-59868
50-59 years, male
1149.3
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
1119.7
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
1116.1
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
1110.8
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
1075.3
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
1066.4
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
1036.0
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
1033.2
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
1032.6
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
1030.0
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
979.7
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
975.7
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
963.5
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
960.2
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
959.3
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
952.5
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
947.5
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
947.2
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
926.5
GTEX-13111-1426-SM-5DUW3
50-59 years, male
920.7
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
913.5
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
894.7
GTEX-117YX-0326-SM-5GICL
50-59 years, male
890.0
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
888.4
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
844.9
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
834.3
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
820.4
GTEX-13113-1226-SM-5EGHT
60-69 years, female
818.2
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
790.0
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
778.4
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
770.8
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
770.6
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
760.8
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
756.2
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
750.1
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
742.9
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
736.5
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
723.7
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
722.2
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
716.5
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
710.2
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
690.9
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
679.1
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
677.1
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
676.5
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
673.3
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
672.3
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
664.2
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
662.6
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
659.9
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
632.5
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
602.2
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
596.1
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
592.5
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
569.6
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
559.3
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
543.7
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
530.5
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
516.0
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
514.6
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
506.9
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
490.5
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
488.0
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
428.6
GTEX-1122O-1326-SM-5H11F
60-69 years, female
417.5
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
397.2
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
384.1
GTEX-ZTSS-0926-SM-59865
40-49 years, male
299.7
GTEX-111YS-1426-SM-5GID8
60-69 years, male
288.4
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.