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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 4382.7
Min RPKM: 1396.9
Std RPKM: 612.5
Median RPKM: 2392.4
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
4382.7
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
4196.1
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
3964.7
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
3869.3
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
3703.9
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
3684.2
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
3499.8
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
3365.7
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
3288.4
GTEX-RU72-2226-SM-46MUE
50-59 years, female
3213.2
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
3154.9
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
3144.8
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
3128.9
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
3066.0
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
3058.3
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
3054.7
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
3026.3
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
2988.3
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
2966.9
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
2962.5
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
2912.7
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
2908.6
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
2895.9
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
2880.6
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
2874.9
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
2766.7
GTEX-S32W-1226-SM-4AD67
50-59 years, female
2751.6
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
2703.1
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
2688.9
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
2668.2
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
2597.3
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
2587.3
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
2566.2
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
2564.5
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
2562.4
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
2554.4
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
2527.7
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
2514.3
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
2500.1
GTEX-11I78-1926-SM-59878
50-59 years, female
2486.7
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
2471.3
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
2456.1
GTEX-P78B-1926-SM-3P616
40-49 years, female
2450.3
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
2449.9
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
2442.2
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
2419.9
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
2398.8
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
2392.6
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
2392.4
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
2347.3
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
2328.9
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
2328.6
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
2319.8
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
2317.0
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
2305.2
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
2300.2
GTEX-S341-0726-SM-4AD5R
40-49 years, female
2300.0
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
2295.6
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
2281.4
GTEX-QCQG-1426-SM-48U22
50-59 years, female
2274.8
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
2241.1
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
2225.4
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
2222.9
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
2218.7
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
2195.0
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
2192.3
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
2182.9
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
2143.9
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
2125.9
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
2121.8
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
2111.9
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
2099.4
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
2020.0
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
1999.8
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
1990.6
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
1951.7
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
1893.1
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
1873.4
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
1855.4
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
1846.5
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
1840.6
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
1807.1
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
1794.9
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
1794.2
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
1792.5
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
1768.4
GTEX-Q734-0726-SM-48TZP
40-49 years, female
1766.4
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
1764.3
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
1750.9
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
1746.7
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
1633.0
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
1603.1
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
1585.8
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
1571.3
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
1497.3
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
1420.3
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
1396.9
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.