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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 500.4
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 540.9
Min RPKM: 156.4
Std RPKM: 82.7
Median RPKM: 275.6
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
540.9
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
512.5
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
512.0
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
497.8
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
494.9
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
482.5
GTEX-144FL-3026-SM-5O99C
50-59 years, male
466.9
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
455.8
GTEX-X585-3026-SM-46MWF
50-59 years, male
452.5
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
451.1
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
447.1
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
445.4
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
420.6
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
414.8
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
414.7
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
409.6
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
409.6
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
406.1
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
404.6
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
404.4
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
402.5
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
368.4
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
358.6
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
355.1
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
352.0
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
351.8
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
346.8
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
335.9
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
330.5
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
327.6
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
325.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
323.9
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
322.6
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
312.8
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
309.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
308.5
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
307.4
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
306.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
301.2
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
300.9
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
299.1
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
296.6
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
291.9
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
291.2
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
290.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
287.8
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
284.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
284.4
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
283.0
GTEX-WL46-2926-SM-3LK82
50-59 years, male
282.9
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
282.1
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
281.3
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
280.1
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
278.3
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
277.2
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
276.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
275.7
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
275.5
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
275.0
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
273.0
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
270.1
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
269.0
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
266.7
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
266.3
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
266.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
265.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
265.2
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
263.9
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
263.1
GTEX-145MF-2726-SM-5O995
50-59 years, male
262.1
GTEX-11GSP-3226-SM-5986O
60-69 years, female
259.3
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
256.9
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
256.6
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
255.5
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
253.6
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
253.3
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
253.0
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
251.3
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
249.5
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
249.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
247.1
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
244.5
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
243.2
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
241.9
GTEX-11PRG-2926-SM-5987A
50-59 years, male
239.1
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
239.0
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
237.8
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
237.0
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
236.3
GTEX-1128S-2726-SM-5H12C
60-69 years, female
235.2
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
235.2
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
235.0
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
234.8
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
231.5
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
230.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
230.0
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
229.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
229.6
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
228.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
223.9
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
218.8
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
218.2
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
218.1
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
217.5
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
216.1
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
214.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
214.3
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
213.7
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
212.6
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
211.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
205.5
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
198.1
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
183.7
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
156.4
Show all
Brain - Frontal Cortex (BA9) RPKM: 323.8
Samples: 108
Max RPKM: 1096.8
Min RPKM: 184.8
Std RPKM: 128.4
Median RPKM: 297.2
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
1096.8
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
805.9
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
755.0
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
677.7
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
475.4
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
471.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
468.3
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
461.8
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
452.3
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
450.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
446.6
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
444.7
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
425.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
421.3
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
418.9
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
418.6
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
417.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
408.6
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
406.7
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
398.9
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
395.6
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
386.1
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
379.0
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
377.7
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
375.7
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
372.7
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
370.2
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
362.1
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
359.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
357.6
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
355.0
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
353.1
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
353.1
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
352.4
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
342.7
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
339.5
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
337.9
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
337.4
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
335.1
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
328.4
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
326.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
320.4
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
318.1
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
317.5
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
317.3
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
312.1
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
311.7
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
310.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
302.6
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
301.6
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
300.0
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
299.9
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
299.1
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
298.8
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
295.5
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
293.4
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
293.2
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
289.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
284.2
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
283.2
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
283.0
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
281.1
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
276.7
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
276.6
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
273.6
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
272.6
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
271.7
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
268.2
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
262.1
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
255.7
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
255.4
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
255.0
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
247.2
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
246.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
245.5
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
245.0
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
243.2
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
242.3
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
242.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
242.0
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
242.0
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
242.0
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
241.0
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
237.2
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
235.7
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
234.9
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
234.8
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
234.2
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
233.5
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
233.2
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
231.8
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
231.8
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
229.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
227.4
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
227.3
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
224.3
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
224.1
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
222.2
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
221.0
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
218.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
217.3
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
213.4
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
203.6
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
200.0
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
196.2
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
187.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
187.1
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
184.8
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.