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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 743.4
Min RPKM: 184.7
Std RPKM: 95.4
Median RPKM: 305.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
743.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
693.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
583.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
567.0
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
526.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
523.8
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
492.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
481.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
480.2
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
465.3
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
452.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
448.4
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
446.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
441.8
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
439.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
417.0
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
414.0
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
411.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
409.5
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
403.9
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
403.2
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
400.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
393.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
386.7
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
385.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
384.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
370.8
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
370.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
369.6
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
364.4
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
361.3
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
361.1
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
361.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
358.5
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
357.2
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
354.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
353.6
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
351.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
348.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
348.5
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
345.4
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
344.8
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
344.3
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
343.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
341.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
341.0
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
332.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
328.4
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
328.3
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
327.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
323.9
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
323.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
320.8
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
318.2
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
316.8
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
315.7
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
312.9
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
308.9
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
305.4
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
305.1
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
304.8
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
303.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
302.1
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
302.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
300.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
296.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
295.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
295.2
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
294.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
294.3
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
294.0
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
293.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
292.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
289.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
288.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
286.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
286.5
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
282.5
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
282.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
282.0
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
281.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
277.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
275.9
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
272.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
269.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
269.5
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
268.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
268.4
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
266.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
264.7
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
260.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
258.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
257.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
256.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
256.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
256.2
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
255.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
252.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
248.4
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
244.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
242.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
241.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
234.3
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
233.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
231.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
231.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
231.3
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
229.7
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
224.4
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
220.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
216.1
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
214.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
198.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
198.5
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
192.2
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
188.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
184.7
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.