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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 2592.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 2043.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 3437.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 3950.7
Min RPKM: 575.4
Std RPKM: 435.7
Median RPKM: 1227.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
3950.7
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
3088.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
3076.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
2916.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
2863.3
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
2125.8
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
2125.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
2094.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
2093.4
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
2083.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
2015.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
2014.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
1967.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
1964.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1920.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
1898.1
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
1868.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
1848.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
1800.2
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
1799.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
1797.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
1796.9
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
1792.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
1791.8
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
1790.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
1766.5
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
1761.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
1751.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
1735.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
1735.2
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
1729.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
1717.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
1695.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
1690.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
1640.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
1623.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
1617.1
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
1601.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
1594.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
1585.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
1581.7
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
1574.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
1559.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
1551.3
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
1550.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
1547.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
1542.3
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
1539.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
1532.3
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
1500.1
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
1474.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
1470.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
1467.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
1463.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
1440.4
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
1433.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
1428.3
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
1425.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
1418.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
1416.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
1408.2
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
1403.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
1401.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
1399.9
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
1389.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
1383.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
1376.1
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
1376.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
1371.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
1370.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
1368.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
1367.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
1361.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
1360.4
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
1357.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
1347.7
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
1341.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
1338.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
1326.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
1321.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
1317.5
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
1314.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
1313.0
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
1311.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
1308.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
1292.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
1286.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
1282.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
1279.8
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
1278.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
1271.6
GTEX-X261-0626-SM-3NMD9
50-59 years, male
1265.4
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
1264.2
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
1260.5
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
1259.5
GTEX-117YX-1426-SM-5H12H
50-59 years, male
1257.5
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
1256.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
1255.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
1255.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
1250.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
1245.3
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
1245.2
GTEX-11P81-1926-SM-5BC53
30-39 years, female
1242.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
1242.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
1238.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
1231.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
1230.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
1224.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
1212.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
1211.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
1203.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
1196.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
1194.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
1193.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
1190.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
1189.4
GTEX-11EI6-0626-SM-5985T
60-69 years, male
1188.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
1184.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
1183.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
1168.8
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
1166.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
1164.2
GTEX-WFON-1826-SM-3GILG
40-49 years, male
1157.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
1152.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
1151.5
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
1150.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
1148.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
1147.5
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
1147.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
1146.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
1145.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
1143.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
1142.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
1141.6
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
1140.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
1135.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
1130.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
1130.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
1119.7
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
1119.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
1119.2
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
1116.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
1114.5
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
1108.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
1107.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
1107.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
1105.1
GTEX-1122O-1226-SM-5H113
60-69 years, female
1102.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
1100.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
1097.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
1094.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
1082.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
1072.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
1069.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
1067.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
1060.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
1054.3
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
1050.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
1040.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
1040.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
1037.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
1037.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
1036.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
1036.4
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
1031.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
1027.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
1022.4
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
1021.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
1013.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
1011.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
1010.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
1009.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
1007.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
1006.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
1005.5
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
1000.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
999.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
991.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
990.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
978.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
972.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
969.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
964.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
959.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
957.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
951.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
951.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
949.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
943.5
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
939.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
929.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
929.1
GTEX-TML8-1226-SM-32QON
40-49 years, female
903.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
897.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
855.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
854.7
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
850.3
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
849.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
831.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
821.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
817.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
812.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
799.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
798.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
780.4
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
778.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
769.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
765.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
734.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
732.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
692.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
659.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
608.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
575.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.