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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 746.4
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 221.9
Min RPKM: 64.5
Std RPKM: 28.3
Median RPKM: 123.6
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
221.9
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
217.4
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
200.1
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
187.7
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
185.4
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
182.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
173.6
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
170.2
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
170.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
168.8
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
164.3
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
163.5
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
162.1
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
160.8
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
160.2
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
159.6
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
158.3
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
157.8
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
157.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
156.3
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
156.2
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
154.8
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
151.2
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
150.5
GTEX-WL46-2926-SM-3LK82
50-59 years, male
150.5
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
148.3
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
147.9
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
147.1
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
145.3
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
144.4
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
142.3
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
141.3
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
140.5
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
140.4
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
139.4
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
139.3
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
138.1
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
138.1
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
136.8
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
135.8
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
134.7
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
134.6
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
134.2
GTEX-11PRG-2926-SM-5987A
50-59 years, male
132.1
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
131.6
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
131.3
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
131.2
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
130.2
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
128.3
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
128.2
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
128.0
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
127.1
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
126.6
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
124.9
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
124.7
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
123.9
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
123.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
123.4
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
122.1
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
121.7
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
121.7
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
120.6
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
120.4
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
120.3
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
119.9
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
119.7
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
118.7
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
117.3
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
116.0
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
115.6
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
115.1
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
114.7
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
114.5
GTEX-1128S-2726-SM-5H12C
60-69 years, female
113.4
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
113.4
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
113.0
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
112.4
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
111.5
GTEX-145MF-2726-SM-5O995
50-59 years, male
110.1
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
110.0
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
110.0
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
109.6
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
109.3
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
105.8
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
105.8
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
105.6
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
105.2
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
104.3
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
104.0
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
102.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
102.4
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
102.4
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
101.9
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
101.5
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
101.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
100.9
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
100.5
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
99.0
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
98.6
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
97.8
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
97.5
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
96.8
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
96.8
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
96.6
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
95.6
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
94.6
GTEX-11GSP-3226-SM-5986O
60-69 years, female
92.7
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
92.2
GTEX-144FL-3026-SM-5O99C
50-59 years, male
90.9
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
90.2
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
88.4
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
87.4
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
84.6
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
64.5
Show all
Brain - Frontal Cortex (BA9) RPKM: 197.0
Samples: 108
Max RPKM: 403.8
Min RPKM: 53.1
Std RPKM: 64.9
Median RPKM: 199.5
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
403.8
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
347.9
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
344.6
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
323.9
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
312.5
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
311.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
294.3
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
289.3
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
283.4
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
280.1
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
272.2
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
265.9
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
262.0
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
259.8
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
259.7
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
257.8
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
256.8
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
256.5
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
255.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
254.4
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
251.0
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
248.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
247.8
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
247.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
245.1
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
244.3
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
243.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
243.5
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
239.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
239.4
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
234.3
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
232.6
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
231.7
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
229.9
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
229.4
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
229.1
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
228.5
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
225.1
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
222.7
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
220.2
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
219.8
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
217.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
217.2
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
214.3
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
208.8
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
207.4
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
207.3
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
207.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
206.8
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
204.0
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
202.1
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
201.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
201.0
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
199.7
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
199.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
197.3
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
196.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
194.2
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
192.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
191.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
189.2
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
186.0
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
184.9
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
178.4
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
177.6
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
174.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
173.4
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
172.8
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
172.0
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
171.2
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
170.2
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
168.1
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
167.0
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
164.2
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
164.0
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
159.1
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
159.0
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
157.6
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
157.6
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
156.8
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
154.8
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
151.8
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
149.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
148.7
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
145.7
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
143.4
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
138.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
136.3
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
134.4
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
131.2
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
129.2
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
125.1
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
123.8
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
122.8
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
121.1
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
115.0
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
113.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
112.2
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
109.8
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
107.0
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
101.6
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
101.3
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
87.9
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
81.3
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
81.2
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
79.3
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
63.2
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
53.1
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.