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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 63.4
Min RPKM: 24.8
Std RPKM: 7.2
Median RPKM: 40.6
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
63.4
GTEX-1192X-2526-SM-59868
50-59 years, male
63.2
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
56.9
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
56.6
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
54.7
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
53.6
GTEX-117YX-0326-SM-5GICL
50-59 years, male
51.2
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
50.5
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
50.1
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
50.1
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
49.5
GTEX-13113-1226-SM-5EGHT
60-69 years, female
48.4
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
48.1
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
48.0
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
47.8
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
47.6
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
47.3
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
46.5
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
45.8
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
45.8
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
45.6
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
45.3
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
45.2
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
44.8
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
44.8
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
44.4
GTEX-13111-1426-SM-5DUW3
50-59 years, male
44.3
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
43.6
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
43.6
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
43.4
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
42.9
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
42.9
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
42.5
GTEX-ZTSS-0926-SM-59865
40-49 years, male
42.0
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
41.9
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
41.7
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
41.3
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
41.3
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
41.2
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
41.1
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
40.8
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
40.8
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
40.7
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
40.6
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
40.6
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
40.1
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
40.1
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
39.9
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
39.5
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
39.3
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
39.1
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
38.5
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
38.3
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
38.2
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
38.0
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
37.9
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
37.9
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
37.6
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
37.5
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
37.5
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
37.0
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
37.0
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
36.9
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
36.1
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
35.8
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
35.7
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
35.6
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
35.4
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
35.3
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
35.3
GTEX-13O61-1326-SM-5KM31
60-69 years, male
35.0
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
34.7
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
34.2
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
34.2
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
34.0
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
33.9
GTEX-1122O-1326-SM-5H11F
60-69 years, female
33.8
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
33.8
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
33.1
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
33.0
GTEX-111YS-1426-SM-5GID8
60-69 years, male
32.9
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
32.4
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
31.6
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
30.7
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
29.3
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
29.2
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
27.1
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
24.8
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.