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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 379.1
Min RPKM: 100.0
Std RPKM: 48.8
Median RPKM: 217.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
379.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
351.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
351.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
338.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
315.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
301.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
299.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
298.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
298.0
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
289.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
286.8
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
272.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
270.6
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
270.4
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
269.2
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
266.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
263.5
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
257.6
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
255.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
254.9
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
253.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
251.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
251.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
250.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
247.7
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
246.1
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
245.2
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
244.3
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
243.8
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
243.6
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
243.4
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
241.3
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
241.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
239.3
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
239.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
238.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
237.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
237.5
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
236.5
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
236.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
235.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
234.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
233.0
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
231.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
231.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
231.8
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
230.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
228.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
227.6
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
227.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
227.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
224.0
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
223.4
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
222.1
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
221.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
220.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
220.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
218.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
217.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
214.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
214.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
212.9
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
211.9
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
211.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
210.1
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
209.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
209.0
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
207.0
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
203.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
203.0
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
202.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
200.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
200.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
200.7
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
200.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
199.0
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
197.0
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
196.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
196.1
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
195.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
194.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
193.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
192.3
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
191.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
191.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
190.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
189.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
189.4
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
186.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
185.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
184.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
184.2
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
180.2
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
180.2
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
177.5
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
175.7
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
175.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
174.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
173.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
166.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
164.9
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
164.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
164.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
162.2
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
161.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
161.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
152.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
151.9
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
151.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
150.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
148.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
147.1
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
134.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
132.8
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
127.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
114.2
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
100.0
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.