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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 46.5
Min RPKM: 0.0
Std RPKM: 12.3
Median RPKM: 14.0
GTEX-111YS-1426-SM-5GID8
60-69 years, male
46.5
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
40.7
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
39.9
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
37.0
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
36.3
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
36.1
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
36.0
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
35.6
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
35.3
GTEX-1122O-1326-SM-5H11F
60-69 years, female
34.5
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
34.0
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
32.9
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
32.6
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
32.3
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
31.8
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
30.4
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
29.1
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
29.0
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
28.3
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
26.9
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
26.9
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
25.6
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
25.5
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
25.3
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
24.9
GTEX-ZTSS-0926-SM-59865
40-49 years, male
24.6
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
24.3
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
23.2
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
21.3
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
21.0
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
20.2
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
19.8
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
19.6
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
19.6
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
19.2
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
18.9
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
18.4
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
17.8
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
17.3
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
16.7
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
16.3
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
15.1
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
15.0
GTEX-13113-1226-SM-5EGHT
60-69 years, female
14.3
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
13.6
GTEX-13O61-1326-SM-5KM31
60-69 years, male
13.4
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
13.4
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
13.2
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
12.2
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
12.2
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
12.1
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
12.0
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
11.5
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
11.4
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
11.3
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
10.9
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
10.8
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
9.6
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
8.7
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
8.6
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
8.2
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
7.2
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
5.9
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
5.8
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
5.2
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
5.1
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
4.6
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
4.3
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
2.7
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
2.3
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
2.1
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
1.9
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
1.9
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
1.9
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
1.8
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
1.8
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
1.2
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
1.1
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
1.1
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
0.8
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
0.8
GTEX-1192X-2526-SM-59868
50-59 years, male
0.7
GTEX-117YX-0326-SM-5GICL
50-59 years, male
0.4
GTEX-13111-1426-SM-5DUW3
50-59 years, male
0.2
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
0.2
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
0.1
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
0.1
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
0.0
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
