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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 568.7
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 440.7
Min RPKM: 49.8
Std RPKM: 77.0
Median RPKM: 218.6
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
440.7
GTEX-X585-3026-SM-46MWF
50-59 years, male
403.4
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
354.4
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
328.8
GTEX-WL46-2926-SM-3LK82
50-59 years, male
327.2
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
326.0
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
311.2
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
305.1
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
301.6
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
292.5
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
292.2
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
288.6
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
287.6
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
286.8
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
285.9
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
284.6
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
283.7
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
283.1
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
280.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
276.6
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
275.6
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
272.3
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
271.0
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
271.0
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
269.2
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
266.0
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
265.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
263.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
261.5
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
261.2
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
260.7
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
259.9
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
257.0
GTEX-11PRG-2926-SM-5987A
50-59 years, male
256.4
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
255.9
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
255.3
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
255.0
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
254.5
GTEX-145MF-2726-SM-5O995
50-59 years, male
254.3
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
252.9
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
249.4
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
244.2
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
240.6
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
238.3
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
237.4
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
237.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
236.2
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
235.3
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
231.1
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
230.6
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
230.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
229.2
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
228.7
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
227.0
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
224.4
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
223.3
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
219.3
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
218.0
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
215.5
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
210.6
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
208.5
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
207.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
206.8
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
201.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
197.9
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
197.0
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
196.6
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
192.6
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
192.4
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
191.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
190.9
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
188.9
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
186.1
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
178.3
GTEX-1128S-2726-SM-5H12C
60-69 years, female
175.7
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
169.3
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
167.9
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
158.5
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
158.5
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
156.5
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
155.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
150.6
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
147.9
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
147.9
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
147.5
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
147.1
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
142.7
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
131.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
131.2
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
128.2
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
127.5
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
127.3
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
127.0
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
125.3
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
120.6
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
118.4
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
111.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
109.2
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
108.6
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
108.6
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
106.5
GTEX-144FL-3026-SM-5O99C
50-59 years, male
106.2
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
104.4
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
103.5
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
99.9
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
94.0
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
89.9
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
89.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
82.4
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
77.1
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
70.2
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
64.0
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
58.7
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
49.8
Show all
Brain - Frontal Cortex (BA9) RPKM: 233.1
Samples: 108
Max RPKM: 498.1
Min RPKM: 42.2
Std RPKM: 109.1
Median RPKM: 253.1
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
498.1
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
407.8
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
405.1
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
404.8
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
385.8
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
383.0
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
379.4
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
375.0
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
375.0
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
375.0
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
372.3
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
371.3
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
365.8
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
365.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
359.2
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
357.7
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
356.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
355.4
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
352.5
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
343.1
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
332.0
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
330.6
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
326.7
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
323.4
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
321.8
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
321.8
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
319.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
313.3
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
311.1
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
308.0
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
307.5
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
305.5
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
305.0
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
304.9
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
304.4
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
300.9
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
297.9
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
297.6
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
295.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
282.4
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
281.4
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
277.8
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
275.2
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
273.6
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
273.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
272.9
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
269.6
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
265.8
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
264.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
261.9
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
260.5
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
259.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
259.1
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
253.9
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
252.2
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
251.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
250.3
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
244.9
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
239.8
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
238.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
238.0
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
233.0
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
231.8
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
226.9
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
223.5
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
200.6
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
200.5
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
199.9
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
192.3
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
191.5
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
188.4
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
178.5
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
176.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
164.4
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
162.9
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
162.3
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
161.4
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
160.4
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
154.2
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
139.8
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
138.7
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
136.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
122.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
120.6
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
120.1
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
109.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
104.3
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
103.3
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
102.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
100.3
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
96.8
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
91.1
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
87.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
81.3
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
77.5
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
76.8
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
76.4
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
73.8
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
71.7
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
68.4
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
66.9
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
56.5
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
52.7
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
51.8
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
48.3
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
44.0
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
43.4
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
42.2
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.