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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 478.5
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 499.6
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 211.2
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 577.8
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 635.6
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 411
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 319.1
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 511.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 436
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 421.1
Min RPKM: 76.4
Std RPKM: 76.0
Median RPKM: 258.9
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
421.1
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
413.4
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
402.7
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
401.8
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
398.2
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
396.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
377.7
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
374.1
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
372.0
GTEX-13112-0226-SM-5P9IV
50-59 years, male
370.9
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
367.0
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
360.7
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
357.7
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
352.2
GTEX-Y111-2426-SM-4TT23
50-59 years, male
351.0
GTEX-REY6-0126-SM-48FDT
60-69 years, male
350.2
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
349.5
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
345.2
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
344.6
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
343.0
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
339.1
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
336.8
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
331.8
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
331.3
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
329.9
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
328.4
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
328.4
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
327.0
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
326.3
GTEX-117XS-2026-SM-5GID1
60-69 years, male
323.7
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
320.1
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
319.8
GTEX-11OF3-1826-SM-5987N
60-69 years, male
314.7
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
313.1
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
312.4
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
312.1
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
310.9
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
309.6
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
308.9
GTEX-11DXZ-2126-SM-59881
50-59 years, male
308.5
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
308.5
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
305.8
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
305.7
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
303.7
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
303.6
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
301.6
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
301.4
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
300.3
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
299.5
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
296.6
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
294.7
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
293.0
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
292.0
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
290.8
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
290.0
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
289.0
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
288.8
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
288.6
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
287.9
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
285.2
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
284.8
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
284.3
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
283.4
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
282.1
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
281.5
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
280.5
GTEX-S95S-1126-SM-4B64E
60-69 years, male
279.9
GTEX-12696-0226-SM-5EGL3
60-69 years, male
279.6
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
277.9
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
274.9
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
274.7
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
273.3
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
273.1
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
272.1
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
271.4
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
270.3
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
270.0
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
269.1
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
267.2
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
266.3
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
266.1
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
265.6
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
265.3
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
263.0
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
260.7
GTEX-V955-1926-SM-4KL1L
60-69 years, male
260.6
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
257.2
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
257.0
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
254.5
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
253.9
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
252.1
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
251.6
GTEX-QLQW-1026-SM-447A9
30-39 years, male
249.5
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
249.3
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
249.1
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
249.0
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
245.9
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
245.7
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
245.3
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
244.8
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
243.3
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
243.0
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
242.5
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
241.3
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
241.1
GTEX-13111-1526-SM-5EGJX
50-59 years, male
241.0
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
240.7
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
240.0
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
238.8
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
238.7
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
238.5
GTEX-R55C-1426-SM-48FED
40-49 years, male
237.8
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
237.2
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
237.0
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
236.2
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
235.4
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
233.5
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
233.4
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
232.8
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
226.4
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
225.8
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
224.4
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
223.5
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
222.7
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
222.3
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
218.6
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
218.5
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
213.9
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
209.8
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
206.3
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
206.3
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
205.9
GTEX-R55D-0126-SM-48FEL
50-59 years, male
201.7
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
199.8
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
199.0
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
198.9
GTEX-X261-2326-SM-4PQYU
50-59 years, male
196.6
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
196.1
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
189.9
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
186.3
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
183.7
GTEX-S33H-0126-SM-4AD62
30-39 years, male
183.6
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
181.3
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
172.5
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
171.9
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
162.8
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
155.1
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
155.0
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
154.4
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
152.8
GTEX-XPT6-1626-SM-4B655
20-29 years, male
152.4
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
146.9
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
145.8
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
144.2
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
143.5
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
141.5
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
140.7
GTEX-RN64-2326-SM-48FDW
50-59 years, male
139.2
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
132.2
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
122.9
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
109.5
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
109.3
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
109.1
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
107.9
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
100.1
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
99.8
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
96.8
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
91.4
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
80.6
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
79.8
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
79.3
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
76.4
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.