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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1134.4
Min RPKM: 202.6
Std RPKM: 189.3
Median RPKM: 450.8
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
1134.4
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
1097.2
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
1020.2
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
919.1
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
872.0
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
827.7
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
798.0
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
765.0
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
728.7
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
710.7
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
706.2
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
697.9
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
678.1
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
674.6
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
656.1
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
652.6
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
644.5
GTEX-QCQG-1226-SM-48U23
50-59 years, female
637.5
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
626.5
GTEX-S341-1226-SM-4AD5S
40-49 years, female
624.2
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
609.9
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
604.3
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
596.2
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
584.8
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
579.4
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
564.3
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
556.2
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
552.2
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
546.7
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
544.2
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
540.2
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
533.1
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
531.7
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
513.5
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
512.0
GTEX-11I78-2026-SM-5987C
50-59 years, female
511.7
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
510.2
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
504.0
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
499.0
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
494.5
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
491.9
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
483.0
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
473.6
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
470.1
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
468.8
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
461.1
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
455.9
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
455.2
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
446.4
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
443.9
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
435.8
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
431.0
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
429.0
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
428.3
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
427.7
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
427.2
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
412.6
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
412.0
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
406.6
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
403.9
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
395.3
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
394.6
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
393.8
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
392.4
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
386.7
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
378.3
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
376.3
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
373.5
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
373.2
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
372.6
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
359.6
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
352.9
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
352.8
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
350.5
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
343.2
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
336.8
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
331.7
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
327.9
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
320.9
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
313.5
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
305.8
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
303.7
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
296.8
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
287.7
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
283.9
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
280.6
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
280.4
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
272.0
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
259.2
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
254.9
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
243.3
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
228.0
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
217.9
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
208.5
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
207.3
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
202.6
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.