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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 551.7
Min RPKM: 211.7
Std RPKM: 76.0
Median RPKM: 357.4
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
551.7
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
546.4
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
503.1
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
500.8
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
499.6
GTEX-R55G-0226-SM-48FEI
40-49 years, female
489.5
GTEX-PX3G-0926-SM-48U12
20-29 years, female
489.3
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
489.3
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
486.6
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
472.0
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
470.6
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
469.3
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
464.0
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
455.7
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
448.7
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
438.9
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
431.4
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
427.8
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
415.7
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
415.1
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
414.9
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
409.6
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
409.3
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
408.4
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
407.1
GTEX-QLQW-0126-SM-447BK
30-39 years, male
404.5
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
404.3
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
401.9
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
397.4
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
395.8
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
393.6
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
392.7
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
387.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
385.2
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
384.4
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
382.6
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
382.5
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
381.4
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
380.2
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
377.7
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
377.3
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
375.7
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
372.5
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
371.2
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
370.8
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
368.9
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
368.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
366.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
366.1
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
362.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
360.5
GTEX-144GN-2126-SM-5O99D
50-59 years, male
359.4
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
355.3
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
354.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
352.6
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
349.6
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
337.8
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
333.2
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
331.6
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
328.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
328.3
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
321.9
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
319.1
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
318.8
GTEX-QV31-0126-SM-447BP
30-39 years, male
318.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
318.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
313.8
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
313.2
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
309.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
309.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
305.4
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
303.9
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
303.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
301.1
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
297.9
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
295.6
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
295.4
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
294.4
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
291.5
GTEX-QCQG-0226-SM-48U28
50-59 years, female
290.2
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
289.0
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
288.3
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
285.2
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
282.6
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
281.5
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
278.1
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
275.8
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
274.5
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
273.2
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
271.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
269.8
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
268.4
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
267.1
GTEX-X585-1826-SM-4QAS3
50-59 years, male
266.9
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
260.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
260.2
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
259.7
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
251.4
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
250.5
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
250.3
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
246.8
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
241.7
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
229.6
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
211.7
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.