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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 858.9
Min RPKM: 181.3
Std RPKM: 94.2
Median RPKM: 290.4
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
858.9
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
631.9
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
535.0
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
492.3
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
480.3
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
448.4
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
426.2
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
410.9
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
405.4
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
401.2
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
399.4
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
397.3
GTEX-QCQG-1426-SM-48U22
50-59 years, female
395.4
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
388.0
GTEX-S32W-1226-SM-4AD67
50-59 years, female
383.8
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
377.4
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
375.3
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
371.7
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
368.9
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
368.3
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
351.7
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
346.8
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
345.3
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
341.1
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
340.9
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
334.3
GTEX-11I78-1926-SM-59878
50-59 years, female
332.9
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
329.3
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
328.4
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
325.6
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
325.1
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
321.8
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
319.2
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
315.6
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
314.2
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
314.1
GTEX-S341-0726-SM-4AD5R
40-49 years, female
306.4
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
306.1
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
305.7
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
304.0
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
301.8
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
300.9
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
300.0
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
296.6
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
296.3
GTEX-RU72-2226-SM-46MUE
50-59 years, female
293.9
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
291.2
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
290.9
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
290.4
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
288.0
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
287.1
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
285.3
GTEX-P78B-1926-SM-3P616
40-49 years, female
285.3
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
284.1
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
280.5
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
280.4
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
279.8
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
279.4
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
274.8
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
273.6
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
273.5
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
270.0
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
269.9
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
269.6
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
269.2
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
267.8
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
267.5
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
266.7
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
265.1
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
262.2
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
258.9
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
256.6
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
254.2
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
254.1
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
251.3
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
248.7
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
248.3
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
246.0
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
242.7
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
241.1
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
236.8
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
235.9
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
235.5
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
234.9
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
232.9
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
232.2
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
230.7
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
227.9
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
209.3
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
208.5
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
207.8
GTEX-Q734-0726-SM-48TZP
40-49 years, female
206.0
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
204.8
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
200.5
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
191.9
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
190.2
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
181.3
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.