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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1010.5
Min RPKM: 124.5
Std RPKM: 190.5
Median RPKM: 489.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
1010.5
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
979.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
937.7
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
928.8
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
822.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
792.1
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
779.7
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
757.6
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
740.8
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
736.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
726.2
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
707.0
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
695.5
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
678.1
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
674.1
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
635.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
633.5
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
633.1
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
626.6
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
623.7
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
623.4
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
621.3
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
620.4
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
613.9
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
612.9
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
610.2
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
598.7
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
592.3
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
590.2
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
587.8
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
576.8
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
573.7
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
570.9
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
570.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
567.2
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
560.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
558.3
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
548.4
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
547.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
532.4
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
529.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
528.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
522.0
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
512.1
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
508.3
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
508.0
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
490.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
487.9
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
466.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
458.5
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
458.4
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
456.4
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
453.7
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
452.6
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
445.3
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
442.8
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
439.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
430.9
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
428.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
423.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
422.0
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
419.1
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
417.8
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
417.5
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
413.7
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
412.5
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
409.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
393.4
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
379.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
373.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
373.3
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
367.3
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
339.4
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
336.2
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
330.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
303.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
292.4
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
292.0
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
284.5
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
282.9
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
269.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
260.9
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
256.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
242.9
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
238.5
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
226.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
222.1
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
210.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
200.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
190.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
183.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
161.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
148.4
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
124.5
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.