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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 3364.2
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1520.7
Min RPKM: 370.2
Std RPKM: 156.4
Median RPKM: 694.8
GTEX-X585-3026-SM-46MWF
50-59 years, male
1520.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
1063.0
GTEX-144FL-3026-SM-5O99C
50-59 years, male
1015.9
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
1007.0
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
942.6
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
918.0
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
901.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
871.9
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
871.5
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
857.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
856.4
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
851.7
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
848.4
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
845.3
GTEX-WL46-2926-SM-3LK82
50-59 years, male
842.7
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
837.6
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
817.2
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
807.3
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
798.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
798.0
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
790.1
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
784.6
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
784.5
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
784.4
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
782.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
778.2
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
774.3
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
771.7
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
767.4
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
766.0
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
763.3
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
763.1
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
759.6
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
758.7
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
757.5
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
756.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
752.0
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
750.0
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
748.7
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
747.5
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
744.9
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
740.7
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
739.8
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
736.9
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
735.1
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
731.2
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
731.2
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
729.8
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
727.6
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
724.1
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
718.4
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
717.1
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
710.8
GTEX-11PRG-2926-SM-5987A
50-59 years, male
709.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
706.4
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
703.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
695.3
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
694.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
692.8
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
688.3
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
680.0
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
679.5
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
677.8
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
676.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
676.4
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
676.4
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
667.3
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
667.1
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
663.0
GTEX-145MF-2726-SM-5O995
50-59 years, male
661.9
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
655.0
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
653.7
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
651.6
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
643.2
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
642.9
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
633.2
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
632.0
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
631.1
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
628.0
GTEX-1128S-2726-SM-5H12C
60-69 years, female
625.6
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
623.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
618.9
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
605.3
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
602.4
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
594.1
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
587.3
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
586.8
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
584.3
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
573.8
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
572.9
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
567.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
564.4
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
555.4
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
554.2
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
548.3
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
527.6
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
523.7
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
507.2
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
505.9
GTEX-11GSP-3226-SM-5986O
60-69 years, female
503.6
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
502.6
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
499.1
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
495.2
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
485.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
476.5
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
475.4
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
469.8
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
469.3
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
464.4
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
442.2
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
437.2
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
425.6
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
377.4
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
370.2
Show all
Brain - Frontal Cortex (BA9) RPKM: 692.6
Samples: 108
Max RPKM: 1165.8
Min RPKM: 307.5
Std RPKM: 158.0
Median RPKM: 695.2
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
1165.8
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
1120.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
965.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
950.9
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
942.7
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
931.1
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
919.9
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
910.8
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
900.8
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
897.5
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
890.0
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
885.0
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
879.5
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
866.4
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
862.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
855.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
855.1
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
829.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
826.6
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
816.3
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
809.8
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
807.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
806.7
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
796.4
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
796.2
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
794.0
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
791.9
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
790.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
788.4
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
786.2
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
786.0
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
780.4
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
779.7
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
779.1
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
777.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
773.8
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
772.3
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
756.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
753.7
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
752.7
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
752.7
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
749.0
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
744.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
744.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
739.9
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
729.9
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
727.9
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
720.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
717.1
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
714.8
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
712.0
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
708.5
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
701.8
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
696.9
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
693.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
690.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
688.7
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
688.6
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
687.7
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
685.2
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
683.2
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
678.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
656.3
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
655.2
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
652.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
651.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
650.9
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
650.3
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
647.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
646.3
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
636.7
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
630.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
626.0
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
625.1
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
622.7
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
621.1
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
620.0
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
617.5
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
613.2
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
601.7
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
597.5
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
594.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
593.0
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
590.0
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
582.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
562.3
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
557.9
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
551.4
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
537.4
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
536.1
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
535.4
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
527.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
526.0
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
520.5
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
509.3
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
507.2
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
499.9
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
466.0
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
461.6
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
446.1
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
433.6
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
424.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
424.0
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
395.7
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
389.3
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
353.3
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
342.7
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
307.5
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.