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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 865.2
Min RPKM: 200.7
Std RPKM: 139.4
Median RPKM: 538.8
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
865.2
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
835.7
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
808.2
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
805.5
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
772.8
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
734.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
732.5
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
727.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
725.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
709.5
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
706.6
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
687.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
685.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
685.5
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
680.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
676.2
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
668.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
663.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
659.7
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
655.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
645.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
644.9
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
640.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
637.2
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
634.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
631.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
624.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
620.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
618.4
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
615.3
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
614.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
610.0
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
609.0
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
607.9
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
607.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
607.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
605.9
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
602.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
601.7
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
599.5
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
595.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
592.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
592.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
591.1
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
589.4
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
584.5
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
583.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
582.6
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
580.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
575.1
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
575.0
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
568.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
559.7
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
558.9
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
558.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
545.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
543.3
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
542.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
538.8
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
538.1
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
532.5
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
532.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
530.9
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
527.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
523.9
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
522.6
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
522.6
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
522.2
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
521.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
506.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
502.7
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
500.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
497.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
494.1
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
493.4
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
484.6
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
483.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
482.5
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
477.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
477.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
475.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
468.6
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
468.5
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
458.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
447.7
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
447.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
446.0
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
436.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
433.9
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
431.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
429.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
427.6
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
424.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
419.6
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
416.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
405.4
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
396.3
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
389.4
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
388.2
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
375.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
356.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
356.7
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
328.8
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
327.4
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
323.3
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
314.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
308.4
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
307.2
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
290.5
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
290.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
284.9
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
284.5
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
277.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
254.0
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
226.6
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
205.5
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
200.7
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.