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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 64.3
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 324.1
Min RPKM: 32.6
Std RPKM: 49.7
Median RPKM: 150.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
324.1
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
276.5
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
268.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
264.8
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
263.3
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
257.6
GTEX-11GSP-3226-SM-5986O
60-69 years, female
254.4
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
248.2
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
245.3
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
231.8
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
228.3
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
226.9
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
225.8
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
224.8
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
221.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
211.7
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
208.0
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
207.9
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
207.2
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
203.6
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
199.1
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
197.4
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
195.7
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
192.0
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
191.6
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
191.5
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
189.3
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
187.3
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
187.1
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
185.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
182.2
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
179.8
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
179.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
177.4
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
174.1
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
173.7
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
173.0
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
168.8
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
166.8
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
166.8
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
166.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
165.0
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
163.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
163.4
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
163.3
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
161.0
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
160.5
GTEX-1128S-2726-SM-5H12C
60-69 years, female
160.1
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
159.8
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
158.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
157.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
157.2
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
154.7
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
153.3
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
152.3
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
151.6
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
150.6
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
149.7
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
148.8
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
147.8
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
146.2
GTEX-145MF-2726-SM-5O995
50-59 years, male
145.7
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
144.1
GTEX-144FL-3026-SM-5O99C
50-59 years, male
143.7
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
143.2
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
142.4
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
142.4
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
142.1
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
141.8
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
141.0
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
140.6
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
140.0
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
138.3
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
137.8
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
136.2
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
135.5
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
134.0
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
133.2
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
133.0
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
132.3
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
130.5
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
129.4
GTEX-11PRG-2926-SM-5987A
50-59 years, male
126.8
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
125.6
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
124.5
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
121.7
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
121.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
120.5
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
120.4
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
120.3
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
120.2
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
120.2
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
119.1
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
113.9
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
112.6
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
111.1
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
110.5
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
110.2
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
108.2
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
107.9
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
106.1
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
105.4
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
105.0
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
100.5
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
100.1
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
99.4
GTEX-X585-3026-SM-46MWF
50-59 years, male
98.5
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
97.9
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
77.2
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
76.6
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
74.9
GTEX-WL46-2926-SM-3LK82
50-59 years, male
73.0
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
69.1
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
32.6
Show all
Brain - Frontal Cortex (BA9) RPKM: 158.4
Samples: 108
Max RPKM: 395.0
Min RPKM: 56.0
Std RPKM: 57.5
Median RPKM: 145.0
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
395.0
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
336.0
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
307.8
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
289.7
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
272.3
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
261.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
253.1
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
250.3
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
240.3
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
239.8
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
236.6
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
232.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
231.8
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
230.0
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
224.0
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
223.4
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
217.7
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
210.9
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
207.9
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
204.8
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
198.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
194.3
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
191.2
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
187.9
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
187.7
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
187.5
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
187.3
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
186.8
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
186.6
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
182.1
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
179.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
179.2
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
173.6
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
173.5
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
173.2
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
172.2
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
171.9
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
169.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
169.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
168.7
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
167.4
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
160.5
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
158.3
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
157.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
156.8
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
155.3
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
155.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
154.9
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
154.0
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
152.8
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
152.1
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
149.7
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
149.2
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
145.2
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
144.9
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
143.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
142.4
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
142.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
141.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
139.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
138.1
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
137.9
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
135.8
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
135.7
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
133.6
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
132.3
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
131.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
131.5
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
131.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
129.8
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
129.7
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
129.4
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
129.0
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
127.4
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
127.3
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
126.2
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
125.7
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
125.1
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
123.7
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
123.1
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
122.1
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
120.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
118.4
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
117.7
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
116.7
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
115.9
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
114.0
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
113.6
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
113.0
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
111.5
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
109.6
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
108.4
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
106.7
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
105.0
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
103.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
102.5
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
102.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
95.5
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
94.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
93.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
91.3
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
88.8
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
88.3
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
81.9
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
74.2
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
70.9
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
61.2
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
56.0
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.