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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 73.2
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 36.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 18.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 638.9
Min RPKM: 10.6
Std RPKM: 126.4
Median RPKM: 121.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
638.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
580.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
566.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
527.3
GTEX-144GM-0926-SM-5O994
20-29 years, male
521.2
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
478.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
459.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
456.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
446.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
432.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
432.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
428.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
414.7
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
396.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
394.2
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
364.7
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
361.2
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
352.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
352.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
349.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
349.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
348.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
348.0
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
347.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
345.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
339.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
335.7
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
331.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
329.5
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
328.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
317.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
316.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
310.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
309.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
309.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
308.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
297.4
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
295.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
294.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
285.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
284.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
278.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
275.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
273.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
272.9
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
270.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
254.3
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
250.9
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
249.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
241.7
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
232.5
GTEX-117YX-1426-SM-5H12H
50-59 years, male
231.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
229.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
219.2
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
217.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
217.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
217.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
217.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
213.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
211.0
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
210.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
210.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
207.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
206.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
204.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
203.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
202.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
199.8
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
198.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
194.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
193.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
191.1
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
187.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
185.1
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
182.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
181.3
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
180.0
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
176.5
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
172.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
171.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
170.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
168.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
160.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
158.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
157.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
157.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
157.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
153.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
147.3
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
146.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
145.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
145.0
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
145.0
GTEX-1192X-2326-SM-5987X
50-59 years, male
143.4
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
143.0
GTEX-1122O-1226-SM-5H113
60-69 years, female
141.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
139.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
136.1
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
135.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
131.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
127.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
127.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
125.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
125.8
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
122.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
122.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
121.7
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
121.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
120.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
119.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
119.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
118.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
118.2
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
114.0
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
112.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
112.2
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
112.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
107.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
106.8
GTEX-X261-0626-SM-3NMD9
50-59 years, male
106.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
104.8
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
103.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
102.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
102.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
101.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
101.7
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
101.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
100.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
99.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
96.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
93.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
90.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
89.3
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
89.1
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
88.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
88.6
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
87.9
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
86.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
86.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
85.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
84.6
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
82.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
82.4
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
82.3
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
81.5
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
80.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
78.8
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
78.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
78.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
78.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
77.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
77.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
77.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
76.9
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
76.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
76.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
73.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
73.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
73.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
72.4
GTEX-111YS-1926-SM-5GICC
60-69 years, male
72.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
70.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
70.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
69.9
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
69.4
GTEX-11EI6-0626-SM-5985T
60-69 years, male
68.7
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
67.5
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
65.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
63.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
61.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
61.4
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
60.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
59.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
59.2
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
58.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
57.0
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
56.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
56.6
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
55.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
55.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
54.3
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
54.1
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
53.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
52.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
50.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
49.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
48.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
48.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
48.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
47.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
46.0
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
45.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
45.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
44.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
44.1
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
44.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
42.5
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
42.2
GTEX-S341-1526-SM-4AD6K
40-49 years, female
41.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
39.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
38.8
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
38.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
37.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
37.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
37.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
36.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
35.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
35.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
34.8
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
30.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
29.3
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
28.8
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
25.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
10.6
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.