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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 505.5
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 341.8
Min RPKM: 91.4
Std RPKM: 54.7
Median RPKM: 225.4
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
341.8
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
321.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
317.9
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
314.5
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
305.7
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
305.1
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
301.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
296.5
GTEX-WL46-2926-SM-3LK82
50-59 years, male
296.5
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
295.1
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
293.4
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
292.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
289.4
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
287.9
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
282.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
281.6
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
280.4
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
279.9
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
275.4
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
274.1
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
274.0
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
273.8
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
272.9
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
272.4
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
269.7
GTEX-X585-3026-SM-46MWF
50-59 years, male
269.6
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
269.4
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
264.5
GTEX-11PRG-2926-SM-5987A
50-59 years, male
260.0
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
259.7
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
259.1
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
257.9
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
256.9
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
256.6
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
256.5
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
255.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
254.2
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
254.0
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
253.5
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
253.4
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
253.2
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
252.2
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
252.0
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
250.7
GTEX-145MF-2726-SM-5O995
50-59 years, male
247.0
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
246.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
245.6
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
243.9
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
243.2
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
241.1
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
237.6
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
233.3
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
232.4
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
230.9
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
230.3
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
228.7
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
225.6
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
225.3
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
224.4
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
222.6
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
221.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
220.8
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
220.3
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
219.9
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
219.5
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
218.5
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
214.8
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
212.5
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
212.3
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
210.3
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
209.4
GTEX-1128S-2726-SM-5H12C
60-69 years, female
207.9
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
207.3
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
206.1
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
205.8
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
202.8
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
200.8
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
195.8
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
193.6
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
187.6
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
187.4
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
187.4
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
186.0
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
185.0
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
180.1
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
178.8
GTEX-144FL-3026-SM-5O99C
50-59 years, male
174.6
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
166.5
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
165.1
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
165.1
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
165.1
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
161.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
160.0
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
159.5
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
158.7
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
155.7
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
155.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
154.3
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
152.4
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
151.4
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
150.7
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
150.1
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
148.2
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
143.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
139.5
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
139.2
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
138.6
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
134.8
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
134.5
GTEX-11GSP-3226-SM-5986O
60-69 years, female
134.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
126.3
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
114.3
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
108.5
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
91.4
Show all
Brain - Frontal Cortex (BA9) RPKM: 224.2
Samples: 108
Max RPKM: 362.6
Min RPKM: 67.6
Std RPKM: 71.5
Median RPKM: 232.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
362.6
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
362.0
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
354.5
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
337.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
330.7
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
328.2
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
327.2
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
322.1
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
321.8
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
320.9
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
318.1
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
317.2
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
314.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
309.4
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
303.0
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
302.7
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
302.5
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
301.2
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
300.1
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
293.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
292.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
292.4
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
290.6
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
285.2
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
283.8
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
283.7
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
277.6
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
276.2
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
276.0
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
275.0
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
269.4
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
266.6
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
266.0
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
265.4
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
261.6
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
258.5
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
257.6
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
255.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
255.0
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
252.7
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
249.2
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
249.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
248.5
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
248.4
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
247.9
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
244.9
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
243.4
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
238.3
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
236.5
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
236.1
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
235.4
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
235.3
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
235.1
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
233.0
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
232.8
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
229.3
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
228.5
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
227.7
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
225.8
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
224.6
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
223.8
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
223.3
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
218.9
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
218.1
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
217.5
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
215.7
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
211.9
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
211.3
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
208.0
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
205.8
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
198.7
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
196.9
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
195.6
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
193.6
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
187.2
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
186.9
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
186.0
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
185.7
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
182.0
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
179.6
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
174.1
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
167.0
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
166.9
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
165.9
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
162.5
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
159.5
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
158.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
153.1
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
140.0
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
134.0
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
133.5
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
131.7
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
128.4
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
126.1
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
122.1
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
119.6
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
117.4
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
113.5
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
113.4
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
109.6
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
102.7
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
101.4
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
100.2
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
99.2
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
93.8
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
91.8
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
90.1
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
67.6
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.