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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 302.8
Min RPKM: 104.6
Std RPKM: 35.4
Median RPKM: 162.6
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
302.8
GTEX-QLQW-0126-SM-447BK
30-39 years, male
274.7
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
248.0
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
234.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
227.7
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
226.3
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
226.2
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
224.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
223.7
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
220.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
215.3
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
214.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
214.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
209.6
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
209.2
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
205.4
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
200.6
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
198.3
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
198.2
GTEX-144GN-2126-SM-5O99D
50-59 years, male
196.0
GTEX-X585-1826-SM-4QAS3
50-59 years, male
194.8
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
193.6
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
193.5
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
193.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
190.1
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
189.7
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
188.8
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
188.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
186.6
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
186.6
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
185.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
185.0
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
184.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
184.4
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
184.2
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
182.0
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
178.7
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
177.0
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
176.8
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
176.3
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
176.2
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
174.8
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
174.0
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
173.6
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
172.7
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
171.5
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
171.3
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
167.0
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
166.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
166.5
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
165.5
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
164.5
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
160.6
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
159.9
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
159.8
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
158.8
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
158.8
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
156.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
153.5
GTEX-PX3G-0926-SM-48U12
20-29 years, female
153.2
GTEX-Q734-0226-SM-48U1A
40-49 years, female
153.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
152.1
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
151.7
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
151.7
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
149.2
GTEX-13111-0126-SM-5EGHO
50-59 years, male
148.6
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
148.0
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
147.9
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
147.9
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
147.0
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
146.3
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
145.9
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
145.9
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
145.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
143.6
GTEX-QCQG-0226-SM-48U28
50-59 years, female
143.0
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
142.6
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
142.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
140.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
140.6
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
140.1
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
140.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
139.5
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
138.4
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
137.5
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
137.2
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
135.6
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
133.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
132.9
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
132.0
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
131.8
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
129.2
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
129.1
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
128.5
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
127.3
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
127.2
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
125.9
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
123.2
GTEX-R55G-0226-SM-48FEI
40-49 years, female
122.6
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
121.2
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
121.2
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
120.6
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
116.3
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
104.6
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.