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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 380
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 416
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 609.7
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 393.1
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 390.8
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 405.4
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 410.5
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 533.9
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 652.5
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 374.6
Min RPKM: 155.3
Std RPKM: 32.2
Median RPKM: 195.7
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
374.6
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
338.1
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
302.0
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
277.9
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
274.7
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
272.8
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
271.0
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
268.8
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
266.7
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
264.0
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
262.6
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
260.5
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
257.0
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
254.8
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
254.4
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
251.9
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
251.5
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
242.8
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
240.1
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
235.3
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
234.9
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
234.6
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
233.1
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
233.1
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
230.1
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
229.0
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
228.5
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
228.1
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
227.7
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
227.4
GTEX-V955-1926-SM-4KL1L
60-69 years, male
227.1
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
226.5
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
226.5
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
224.4
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
222.6
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
220.8
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
220.4
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
219.6
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
219.0
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
218.8
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
218.5
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
218.4
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
218.1
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
217.8
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
217.7
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
215.7
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
215.7
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
214.4
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
214.0
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
213.6
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
213.6
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
212.8
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
211.4
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
211.4
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
210.7
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
209.3
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
209.2
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
208.9
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
208.7
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
206.1
GTEX-R55C-1426-SM-48FED
40-49 years, male
205.9
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
205.8
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
204.7
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
204.5
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
204.3
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
204.0
GTEX-S95S-1126-SM-4B64E
60-69 years, male
203.6
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
203.4
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
203.0
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
202.7
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
202.3
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
202.2
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
201.8
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
201.2
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
200.9
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
200.4
GTEX-QLQW-1026-SM-447A9
30-39 years, male
199.4
GTEX-REY6-0126-SM-48FDT
60-69 years, male
199.2
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
198.8
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
198.6
GTEX-XPT6-1626-SM-4B655
20-29 years, male
198.5
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
198.3
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
197.8
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
197.8
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
196.9
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
195.7
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
195.6
GTEX-X261-2326-SM-4PQYU
50-59 years, male
195.1
GTEX-11OF3-1826-SM-5987N
60-69 years, male
194.7
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
194.2
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
193.9
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
193.7
GTEX-13111-1526-SM-5EGJX
50-59 years, male
193.7
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
193.2
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
193.1
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
192.9
GTEX-RN64-2326-SM-48FDW
50-59 years, male
192.8
GTEX-11DXZ-2126-SM-59881
50-59 years, male
192.3
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
192.1
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
191.9
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
191.9
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
191.8
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
191.6
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
191.5
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
190.9
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
190.3
GTEX-117XS-2026-SM-5GID1
60-69 years, male
190.2
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
189.7
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
189.6
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
189.4
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
189.3
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
189.2
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
189.2
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
189.2
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
188.9
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
188.9
GTEX-S33H-0126-SM-4AD62
30-39 years, male
187.1
GTEX-R55D-0126-SM-48FEL
50-59 years, male
186.4
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
185.6
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
185.3
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
185.2
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
185.0
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
185.0
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
185.0
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
184.8
GTEX-13112-0226-SM-5P9IV
50-59 years, male
184.6
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
184.5
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
184.4
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
184.3
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
183.6
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
182.5
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
182.5
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
182.0
GTEX-12696-0226-SM-5EGL3
60-69 years, male
181.9
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
181.5
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
180.7
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
179.9
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
179.9
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
179.8
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
179.8
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
179.6
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
179.5
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
179.5
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
179.1
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
178.8
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
178.6
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
178.6
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
178.3
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
177.9
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
176.8
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
176.4
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
175.0
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
174.5
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
173.5
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
173.4
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
170.7
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
170.4
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
169.5
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
166.3
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
166.3
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
166.1
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
165.8
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
164.8
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
163.5
GTEX-Y111-2426-SM-4TT23
50-59 years, male
163.4
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
161.3
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
160.9
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
160.4
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
156.4
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
156.0
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
156.0
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
155.3
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.