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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 768.3
Min RPKM: 372.7
Std RPKM: 92.0
Median RPKM: 546.8
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
768.3
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
755.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
753.2
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
733.0
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
718.2
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
715.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
700.0
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
698.2
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
697.7
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
692.4
GTEX-QCQG-0226-SM-48U28
50-59 years, female
677.1
GTEX-R55G-0226-SM-48FEI
40-49 years, female
673.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
663.1
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
660.8
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
657.1
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
656.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
656.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
656.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
652.5
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
644.6
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
644.1
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
639.6
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
636.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
625.8
GTEX-QV31-0126-SM-447BP
30-39 years, male
619.5
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
616.3
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
612.6
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
611.4
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
607.3
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
605.5
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
604.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
601.0
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
600.8
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
588.3
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
583.6
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
582.1
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
581.9
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
577.2
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
575.1
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
565.8
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
564.5
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
563.9
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
559.8
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
559.6
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
558.9
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
557.1
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
555.3
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
553.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
552.8
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
551.8
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
551.4
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
549.4
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
544.2
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
543.1
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
541.4
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
539.4
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
535.0
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
525.3
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
521.8
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
520.0
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
518.2
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
515.7
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
512.6
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
512.5
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
511.0
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
504.2
GTEX-PX3G-0926-SM-48U12
20-29 years, female
502.0
GTEX-QLQW-0126-SM-447BK
30-39 years, male
501.8
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
501.1
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
499.5
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
498.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
497.6
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
497.2
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
496.6
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
489.8
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
489.5
GTEX-X585-1826-SM-4QAS3
50-59 years, male
485.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
482.9
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
482.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
481.0
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
480.6
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
476.6
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
467.9
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
466.8
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
455.3
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
454.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
454.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
450.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
449.0
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
448.8
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
448.4
GTEX-13111-0126-SM-5EGHO
50-59 years, male
446.8
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
444.0
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
439.5
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
438.8
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
435.9
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
433.8
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
431.1
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
430.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
427.7
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
393.4
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
372.9
GTEX-Q734-0226-SM-48U1A
40-49 years, female
372.8
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
372.7
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.